RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 SYT4Q9H2B2 425 aa12.85□□□□□ -0.35
LIG1-215ENST00000597901 RERGLQ9H628 205 aa12.85□□□□□ -0.35
LIG1-215ENST00000597901 ELOVL3Q9HB03 270 aa12.85□□□□□ -0.35
LIG1-215ENST00000597901 DECR2Q9NUI1 292 aa12.85□□□□□ -0.35
LIG1-215ENST00000597901 KLHL21Q9UJP4 597 aa12.85□□□□□ -0.35
LIG1-215ENST00000597901 RTTNQ86VV8 2226 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 SOCS2O14508 198 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 ARPC2O15144 300 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 THBS2P35442 1172 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 ZNF81P51508 661 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 MMP15P51511 669 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 RPS6KA3P51812 740 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 ARHGDIAP52565 204 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 LSM6P62312 80 aaKnown RBP12.84□□□□□ -0.35
LIG1-215ENST00000597901 SPIBQ01892 262 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 TEKQ02763 1124 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 SCRN3Q0VDG4 424 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 CCNIQ14094 377 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 SPATS1Q496A3 300 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 TMEM255AQ5JRV8 349 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 OTPQ5XKR4 325 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 ARL9Q6T311 187 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 PTCHD4Q6ZW05 846 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 RFPL4BQ6ZWI9 263 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 GLB1L2Q8IW92 636 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 IPCEF1Q8WWN9 437 aaPredicted RBP12.84□□□□□ -0.35
LIG1-215ENST00000597901 NARFLQ9H6Q4 476 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 IL1RAPQ9NPH3 570 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 NDE1Q9NXR1 346 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 TREM2Q9NZC2 230 aa12.84□□□□□ -0.35
LIG1-215ENST00000597901 TMEFF2Q9UIK5 374 aaPredicted RBP12.84□□□□□ -0.35
LIG1-215ENST00000597901 NDRG4Q9ULP0 352 aaKnown RBP12.84□□□□□ -0.35
LIG1-215ENST00000597901 B2RBV5 119 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 B4DSR2 109 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 TPD52L2O43399 206 aaKnown RBP12.83□□□□□ -0.36
LIG1-215ENST00000597901 SGCEO43556 437 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 SPRY3O43610 288 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 OR10H3O60404 316 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 IGHV1-46P01743 117 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 FABP3P05413 133 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 SRD5A1P18405 259 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 LIPAP38571 399 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 MNAT1P51948 309 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 MXRA7P84157 204 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 KCNMB1Q16558 191 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 USP51Q70EK9 711 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 VASH1Q7L8A9 365 aaPredicted RBP12.83□□□□□ -0.36
LIG1-215ENST00000597901 ADCK1Q86TW2 530 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 FITM2Q8N6M3 262 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 NSL1Q96IY1 281 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 TSSK2Q96PF2 358 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 ERMAPQ96PL5 475 aaPredicted RBP12.83□□□□□ -0.36
LIG1-215ENST00000597901 CCT8L2Q96SF2 557 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 SRA1Q9HD15 236 aaKnown RBP12.83□□□□□ -0.36
LIG1-215ENST00000597901 CYSLTR2Q9NS75 346 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 TBCCD1Q9NVR7 557 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 TMCC3Q9ULS5 477 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 B9D1Q9UPM9 204 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 STARD10Q9Y365 291 aa12.83□□□□□ -0.36
LIG1-215ENST00000597901 FBN1P35555 2871 aaKnown RBP12.83□□□□□ -0.36
LIG1-215ENST00000597901 IGHV1-69-2A0A0G2JMI3 117 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 PLSCR5A0PG75 271 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 H3BSA7 217 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 ARPC3O15145 178 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 PPP1R3DO95685 299 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 ABHD16AO95870 558 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 TUBG1P23258 451 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 CRABP1P29762 137 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 RRM2P31350 389 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 IFNGR2P38484 337 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 HTR5AP47898 357 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 CENPAP49450 140 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 HMGA2P52926 109 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 DVL1P1P54792 670 aaPredicted RBP12.82□□□□□ -0.36
LIG1-215ENST00000597901 LMO4P61968 165 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 MVKQ03426 396 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 PSG7Q13046 419 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 AQP6Q13520 282 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 CCDC92Q53HC0 331 aaPredicted RBP12.82□□□□□ -0.36
LIG1-215ENST00000597901 FAM209AQ5JX71 171 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 C1orf94Q6P1W5 598 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 ZDHHC21Q8IVQ6 265 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 GNPDA2Q8TDQ7 276 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 SAMD8Q96LT4 415 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 OR52D1Q9H346 318 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 TUBG2Q9NRH3 451 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 PLEK2Q9NYT0 353 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 ASH2LQ9UBL3 628 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 GRIP1Q9Y3R0 1128 aa12.82□□□□□ -0.36
LIG1-215ENST00000597901 DNHD1Q96M86 4753 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 ZSCAN5BA6NJL1 495 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 FAM157AC9JC47 383 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 DCTN6O00399 190 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 PHF1O43189 567 aaPredicted RBP12.81□□□□□ -0.36
LIG1-215ENST00000597901 DOK2O60496 412 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 KRT36O76013 467 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 GPANK1O95872 356 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 TFP02787 698 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 ADH4P08319 380 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 FPR3P25089 353 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms