RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 TEKQ02763 1124 aa13.18□□□□□ -0.3
TRIM47-206ENST00000592942 GINS1Q14691 196 aa13.18□□□□□ -0.3
TRIM47-206ENST00000592942 RSPO1Q2MKA7 263 aaPredicted RBP13.18□□□□□ -0.3
TRIM47-206ENST00000592942 KRTAP21-3Q3LHN1 58 aa13.18□□□□□ -0.3
TRIM47-206ENST00000592942 Q5PR19 223 aa13.18□□□□□ -0.3
TRIM47-206ENST00000592942 DNM1P34Q6PK57 102 aa13.18□□□□□ -0.3
TRIM47-206ENST00000592942 LRP11Q86VZ4 500 aa13.18□□□□□ -0.3
TRIM47-206ENST00000592942 ATG16L2Q8NAA4 619 aa13.18□□□□□ -0.3
TRIM47-206ENST00000592942 OR1J2Q8NGS2 313 aa13.18□□□□□ -0.3
TRIM47-206ENST00000592942 BDH2Q9BUT1 245 aa13.18□□□□□ -0.3
TRIM47-206ENST00000592942 TMUB1Q9BVT8 246 aa13.18□□□□□ -0.3
TRIM47-206ENST00000592942 HCAR1Q9BXC0 346 aa13.18□□□□□ -0.3
TRIM47-206ENST00000592942 CMC2Q9NRP2 79 aa13.18□□□□□ -0.3
TRIM47-206ENST00000592942 KLHL21Q9UJP4 597 aa13.18□□□□□ -0.3
TRIM47-206ENST00000592942 NIPBLQ6KC79 2804 aaeCLIP13.18□□□□□ -0.3
TRIM47-206ENST00000592942 G3V2T6 193 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 H3BN98 237 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 H7C417 338 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 RER1O15258 196 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 SYNGR3O43761 229 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 MITFO75030 526 aaPredicted RBP13.17□□□□□ -0.3
TRIM47-206ENST00000592942 FAM157BP0CG42 384 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 PSKH1P11801 424 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 FCGR1AP12314 374 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 POU1F1P28069 291 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 APLNRP35414 380 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 CENPAP49450 140 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 SLC25A1P53007 311 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 ERVS71-1P61550 626 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 AQP6Q13520 282 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 TBC1D28Q2M2D7 210 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 LINC01590Q5TEZ4 76 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 TMEM236Q5W0B7 351 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 KDM4DQ6B0I6 523 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 LYPD4Q6UWN0 246 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 DNM1P46Q6ZS02 220 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 VASH1Q7L8A9 365 aaPredicted RBP13.17□□□□□ -0.3
TRIM47-206ENST00000592942 HIPK1Q86Z02 1210 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 ZNF101Q8IZC7 436 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 OR51L1Q8NGJ5 315 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 OR9Q1Q8NGQ5 310 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 TEX47Q8TBZ9 253 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 MRPL24Q96A35 216 aaKnown RBP13.17□□□□□ -0.3
TRIM47-206ENST00000592942 TRMT61AQ96FX7 289 aaKnown RBP13.17□□□□□ -0.3
TRIM47-206ENST00000592942 CENPNQ96H22 339 aaPredicted RBP13.17□□□□□ -0.3
TRIM47-206ENST00000592942 PKP2Q99959 881 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 MRPL37Q9BZE1 423 aaKnown RBP13.17□□□□□ -0.3
TRIM47-206ENST00000592942 GABARAPL1Q9H0R8 117 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 SEMA6AQ9H2E6 1030 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 DCLRE1BQ9H816 532 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 ZNF556Q9HAH1 456 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 DLL4Q9NR61 685 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 ASH2LQ9UBL3 628 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 TMEFF2Q9UIK5 374 aaPredicted RBP13.17□□□□□ -0.3
TRIM47-206ENST00000592942 CMAHPQ9Y471 501 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 SPEF1Q9Y4P9 236 aa13.17□□□□□ -0.3
TRIM47-206ENST00000592942 MAP1AP78559 2803 aaPredicted RBP13.16□□□□□ -0.3
TRIM47-206ENST00000592942 C5orf49A4QMS7 147 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 OR6C6A6NF89 314 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 ICMTO60725 284 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 NGFP01138 241 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 GYPBP06028 91 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 COX5BP10606 129 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 SPI1P17947 270 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 EPHA2P29317 976 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 EVX1P49640 407 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 CRISP1P54107 249 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 GALK2Q01415 458 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 GLO1Q04760 184 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 SCRN3Q0VDG4 424 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 SLC27A4Q6P1M0 643 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 CORO6Q6QEF8 472 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.16□□□□□ -0.3
TRIM47-206ENST00000592942 ALDH16A1Q8IZ83 802 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 PARP8Q8N3A8 854 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 SVOPLQ8N434 492 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 OR2T4Q8NH00 348 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 SLC7A6Q92536 515 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 MED20Q9H944 212 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 CDH20Q9HBT6 801 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 SLC25A19Q9HC21 320 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 PAPOLBQ9NRJ5 636 aaKnown RBP13.16□□□□□ -0.3
TRIM47-206ENST00000592942 MYEF2Q9P2K5 600 aaKnown RBP13.16□□□□□ -0.3
TRIM47-206ENST00000592942 CYB5R1Q9UHQ9 305 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 FZR1Q9UM11 496 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 MED13LQ71F56 2210 aa13.16□□□□□ -0.3
TRIM47-206ENST00000592942 FAM183AA6NL82 134 aa13.15□□□□□ -0.3
TRIM47-206ENST00000592942 SURF4O15260 269 aa13.15□□□□□ -0.3
TRIM47-206ENST00000592942 SGCEO43556 437 aa13.15□□□□□ -0.3
TRIM47-206ENST00000592942 ZNF250P15622 560 aa13.15□□□□□ -0.3
TRIM47-206ENST00000592942 CCNOP22674 350 aa13.15□□□□□ -0.3
TRIM47-206ENST00000592942 RAD52P43351 418 aa13.15□□□□□ -0.3
TRIM47-206ENST00000592942 GDI2P50395 445 aaKnown RBP13.15□□□□□ -0.3
TRIM47-206ENST00000592942 EFNB1P98172 346 aa13.15□□□□□ -0.3
TRIM47-206ENST00000592942 PTGES3Q15185 160 aaKnown RBP13.15□□□□□ -0.3
TRIM47-206ENST00000592942 PCK2Q16822 640 aa13.15□□□□□ -0.3
TRIM47-206ENST00000592942 KRTAP27-1Q3LI81 207 aa13.15□□□□□ -0.3
TRIM47-206ENST00000592942 TMEM255AQ5JRV8 349 aa13.15□□□□□ -0.3
TRIM47-206ENST00000592942 SLC18B1Q6NT16 456 aa13.15□□□□□ -0.3
TRIM47-206ENST00000592942 ZDHHC13Q8IUH4 622 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms