RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 GBA3Q9H227 469 aa2.09□□□□□ -2.07
CACNA1A-208ENST00000587451 LINC00597Q9H2U6 94 aa2.09□□□□□ -2.07
CACNA1A-208ENST00000587451 POLE4Q9NR33 117 aa2.09□□□□□ -2.07
CACNA1A-208ENST00000587451 ZNF355PQ9NSJ1 428 aa2.09□□□□□ -2.07
CACNA1A-208ENST00000587451 SLC2A8Q9NY64 477 aa2.09□□□□□ -2.07
CACNA1A-208ENST00000587451 MTCH1Q9NZJ7 389 aa2.09□□□□□ -2.07
CACNA1A-208ENST00000587451 CD300AQ9UGN4 299 aa2.09□□□□□ -2.07
CACNA1A-208ENST00000587451 VANGL2Q9ULK5 521 aa2.09□□□□□ -2.07
CACNA1A-208ENST00000587451 ATP6V1DQ9Y5K8 247 aa2.09□□□□□ -2.07
CACNA1A-208ENST00000587451 KANK1Q14678 1352 aa2.09□□□□□ -2.08
CACNA1A-208ENST00000587451 A0A1W2PPV4 95 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 SNTNA6NMZ2 147 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 IQCF5A8MTL0 148 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 C9JVG2 144 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 HAS3O00219 553 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 TRDMT1O14717 391 aaKnown RBP2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 NDUFS6O75380 124 aaKnown RBP2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 SRP72O76094 671 aaKnown RBP2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 MPZL1O95297 269 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 AP2A1O95782 977 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 FTH1P02794 183 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 DBTP11182 482 aaKnown RBP2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 GCAP28676 217 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 LAP3P28838 519 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 CDH4P55283 916 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 CDH6P55285 790 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 RGS8P57771 180 aaPredicted RBP2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 DAOAP59103 153 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 RAB11AP62491 216 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 RAP1AP62834 184 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 TNNC1P63316 161 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 ITGB3BPQ13352 177 aaPredicted RBP2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 NCF4Q15080 339 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 RAB11BQ15907 218 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 GGTA1PQ4G0N0 100 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 PDZK1Q5T2W1 519 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 MLIPQ5VWP3 458 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 SPECC1LQ69YQ0 1117 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 OR2A2Q6IF42 318 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 BRD3OSQ6XYD6 125 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 NDUFAF7Q7L592 441 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 NELFCDQ8IXH7 590 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 GTPBP8Q8N3Z3 284 aaPredicted RBP2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 RNF10Q8N5U6 811 aaKnown RBP2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 FAM83FQ8NEG4 500 aaPredicted RBP2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 SDR9C7Q8NEX9 313 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 MAIP1Q8WWC4 291 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 RAB1CQ92928 201 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 TOP1MTQ969P6 601 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 LRRC45Q96CN5 670 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 AMDHD1Q96NU7 426 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 CYTH2Q99418 400 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 UPF3BQ9BZI7 483 aaKnown RBP2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 NDEL1Q9GZM8 345 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 MCCC2Q9HCC0 563 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 SDHAF3Q9NRP4 125 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 UFSP2Q9NUQ7 469 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 THUMPD1Q9NXG2 353 aaKnown RBP2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 IL36GQ9NZH8 169 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 ZNRD1Q9P1U0 126 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 CTSFQ9UBX1 484 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 PITPNC1Q9UKF7 332 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 ADAM28Q9UKQ2 775 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 SLC22A14Q9Y267 594 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 CBY1Q9Y3M2 126 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 MN1Q10571 1320 aaPredicted RBP2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 INSRP06213 1382 aa2.08□□□□□ -2.08
CACNA1A-208ENST00000587451 BRWD3Q6RI45 1802 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 TET2Q6N021 2002 aaPredicted RBP2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 A0A0J9YYE9 177 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 SMCO3A2RU48 225 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 TRPC5OSA6NMA1 111 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 POLR1CO15160 346 aaPredicted RBP2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 RBFOX2O43251 390 aaKnown RBP eCLIP2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 CHMP2AO43633 222 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 LCA5LO95447 670 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 H6PDO95479 791 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 TSPAN12O95859 305 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 CST1P01037 141 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 TRBC1P01850 177 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 ERCC1P07992 297 aaPredicted RBP2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 ETS2P15036 469 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 TNNI1P19237 187 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 GSTM3P21266 225 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 CASP14P31944 242 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 P2RY1P47900 373 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 CCT3P49368 545 aaKnown RBP2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 ERVK-25P63136 954 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 SKP1P63208 163 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 MEF2BQ02080 365 aaPredicted RBP2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 ACVR1Q04771 509 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 GNA13Q14344 377 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 SLC15A2Q16348 729 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 MRPL23Q16540 153 aaKnown RBP2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 OR4F3Q6IEY1 312 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 TMEM107Q6UX40 140 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 TRMT10CQ7L0Y3 403 aaKnown RBP2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 DHDDSQ86SQ9 333 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 PLA2G4DQ86XP0 818 aa2.07□□□□□ -2.08
CACNA1A-208ENST00000587451 SELENOHQ8IZQ5 122 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms