RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 TNFRSF1BP20333 461 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 CDAP32320 146 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 GDI2P50395 445 aaKnown RBP11.18□□□□□ -0.62
SPG7-221ENST00000569720 SLC3A1Q07837 685 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 ST3GAL3Q11203 375 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 PIN1Q13526 163 aaPredicted RBP11.18□□□□□ -0.62
SPG7-221ENST00000569720 RIPK1Q13546 671 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 KPNB1Q14974 876 aaKnown RBP11.18□□□□□ -0.62
SPG7-221ENST00000569720 TSTQ16762 297 aaKnown RBP11.18□□□□□ -0.62
SPG7-221ENST00000569720 ALG10Q5BKT4 473 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 ARMC4Q5T2S8 1044 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 ADGRG5Q8IZF4 528 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 OR4M2Q8NGB6 313 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 MOSPD2Q8NHP6 518 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 FNDC8Q8TC99 324 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 CANT1Q8WVQ1 401 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 NSMAFQ92636 917 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 C7orf34Q96L11 122 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 JMJD8Q96S16 334 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 ALG12Q9BV10 488 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 EGLN1Q9GZT9 426 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 RASSF4Q9H2L5 321 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 TXNIPQ9H3M7 391 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 DCLRE1BQ9H816 532 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 CYSLTR2Q9NS75 346 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 C20orf141Q9NUB4 165 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 GMPR2Q9P2T1 348 aaKnown RBP11.18□□□□□ -0.62
SPG7-221ENST00000569720 PCDHB10Q9UN67 800 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 WIPI2Q9Y4P8 454 aa11.18□□□□□ -0.62
SPG7-221ENST00000569720 DYSFO75923 2080 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 TRIM77I1YAP6 450 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 TSPAN19P0C672 248 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 LIPAP38571 399 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 OR1E2P47887 323 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 ARHGDIAP52565 204 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 HMGA2P52926 109 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 PCBD1P61457 104 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 ACTG1P63261 375 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 FMODQ06828 376 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 TOP3AQ13472 1001 aaPredicted RBP11.17□□□□□ -0.62
SPG7-221ENST00000569720 LAPTM4AQ15012 233 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 THEM4Q5T1C6 240 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 FAM27BQ5VT28 67 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 USP43Q70EL4 1123 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 ZDHHC21Q8IVQ6 265 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 RNF113BQ8IZP6 322 aaKnown RBP11.17□□□□□ -0.62
SPG7-221ENST00000569720 SEMA6DQ8NFY4 1073 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 HDAC2Q92769 488 aaKnown RBP11.17□□□□□ -0.62
SPG7-221ENST00000569720 NABP1Q96AH0 204 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 NRBF2Q96F24 287 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 POM121L2Q96KW2 1035 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 PRRC1Q96M27 445 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 CHID1Q9BWS9 393 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 ELOVL3Q9HB03 270 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 G6PC2Q9NQR9 355 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 CGGBP1Q9UFW8 167 aaPredicted RBP11.17□□□□□ -0.62
SPG7-221ENST00000569720 AURKCQ9UQB9 309 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 HIF3AQ9Y2N7 669 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 UGT2A1Q9Y4X1 527 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 TENM1Q9UKZ4 2725 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 TANC2Q9HCD6 1990 aa11.17□□□□□ -0.62
SPG7-221ENST00000569720 LOC105371242A0A075B767 164 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 A0A1W2PRQ8 180 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 H3BSA7 217 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 J3QLI3 93 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 SPRY3O43610 288 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 PLPP2O43688 288 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 IGHV2-5P01817 119 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 CST2P09228 141 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 IFI30P13284 250 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 EPHA1P21709 976 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 GATA3P23771 443 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 FASP25445 335 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 RPL27P61353 136 aaKnown RBP11.16□□□□□ -0.62
SPG7-221ENST00000569720 ERVK-25P63136 954 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 ELF3P78545 371 aaPredicted RBP11.16□□□□□ -0.62
SPG7-221ENST00000569720 PSG4Q00888 419 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 DGCR6Q14129 220 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 ZMAT1Q5H9K5 638 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 SPATA46Q5T0L3 261 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 DCAF12L2Q5VW00 463 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 MBNL2Q5VZF2 373 aaKnown RBP11.16□□□□□ -0.62
SPG7-221ENST00000569720 FAM205BPQ63HN1 556 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 SLC25A47Q6Q0C1 308 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 ARL9Q6T311 187 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 VTCN1Q7Z7D3 282 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 PEG10Q86TG7 708 aaKnown RBP11.16□□□□□ -0.62
SPG7-221ENST00000569720 ZNF101Q8IZC7 436 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 AKR7LQ8NHP1 331 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 SLC25A40Q8TBP6 338 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 IPCEF1Q8WWN9 437 aaPredicted RBP11.16□□□□□ -0.62
SPG7-221ENST00000569720 CCL17Q92583 94 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 GTF3AQ92664 365 aaKnown RBP11.16□□□□□ -0.62
SPG7-221ENST00000569720 NMD3Q96D46 503 aaKnown RBP11.16□□□□□ -0.62
SPG7-221ENST00000569720 BPIFA2Q96DR5 249 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 MARS2Q96GW9 593 aaKnown RBP11.16□□□□□ -0.62
SPG7-221ENST00000569720 DIRC2Q96SL1 478 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 GAL3ST1Q99999 423 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 FNDC11Q9BVV2 318 aa11.16□□□□□ -0.62
SPG7-221ENST00000569720 OR2J1Q9GZK6 312 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms