RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 RLFQ13129 1914 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 BAZ2AQ9UIF9 1905 aaKnown RBP8.49□□□□□ -1.05
CDH1-205ENST00000562836 LTBP3Q9NS15 1303 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 ZNF593O00488 134 aaPredicted RBP8.49□□□□□ -1.05
CDH1-205ENST00000562836 CEACAM4O75871 244 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 CD160O95971 181 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 FGF5P12034 268 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 TBPL1P62380 186 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 CCL7P80098 99 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 OC90Q02509 493 aaPredicted RBP8.49□□□□□ -1.05
CDH1-205ENST00000562836 EIF5AL1Q6IS14 154 aaKnown RBP8.49□□□□□ -1.05
CDH1-205ENST00000562836 ALKAL1Q6UXT8 129 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 CPEB2Q7Z5Q1 589 aaKnown RBP8.49□□□□□ -1.05
CDH1-205ENST00000562836 C17orf78Q8N4C9 275 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 TMEM151AQ8N4L1 468 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 SARAFQ96BY9 339 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 MGLLQ99685 303 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 MS4A8Q9BY19 250 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 TAS2R16Q9NYV7 291 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 SPG21Q9NZD8 308 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 RNF115Q9Y4L5 304 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 NHSL1Q5SYE7 1610 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 CACNA1SQ13698 1873 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 NUP98P52948 1817 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 RNASEK-C17orf49H0YIS7 233 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 ALOX12BO75342 701 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 OR2C1O95371 312 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 FBXO45P0C2W1 286 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 ZBTB25P24278 435 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 ELLP55199 621 aaPredicted RBP8.48□□□□□ -1.05
CDH1-205ENST00000562836 TPI1P60174 286 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 TCP10Q12799 353 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 SSX1Q16384 188 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 LTC4SQ16873 150 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 TMEM241Q24JQ0 296 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 ASPRV1Q53RT3 343 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 PRSS54Q6PEW0 395 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 LAPTM4BQ86VI4 370 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 MDGA1Q8NFP4 955 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 OR1J4Q8NGS1 313 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 TMEM163Q8TC26 289 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 GGHQ92820 318 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 WBP2Q969T9 261 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 PNPLA2Q96AD5 504 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 ZNF582Q96NG8 517 aaPredicted RBP8.48□□□□□ -1.05
CDH1-205ENST00000562836 WRAP53Q9BUR4 548 aaKnown RBP8.48□□□□□ -1.05
CDH1-205ENST00000562836 WDR13Q9H1Z4 485 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 Q9N2J8 555 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 RAB18Q9NP72 206 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 CICQ96RK0 1608 aaPredicted RBP8.48□□□□□ -1.05
CDH1-205ENST00000562836 KIF13BQ9NQT8 1826 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 ZCWPW2A0A1B0GU75 182 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 TCRBV7S3A2A0A539 114 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 GAGE12BA1L429 117 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 OR2M5A3KFT3 312 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 IDSB3KWA1 339 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 SC5DO75845 299 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 HLA-DOAP06340 250 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 OR5AC1P0C628 307 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 TYRP14679 529 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 PGAM2P15259 253 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 ARSAP15289 507 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 SSTR5P35346 364 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 AGTR2P50052 363 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 PAFAH1B2P68402 229 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 SRSF6Q13247 344 aaKnown RBP8.48□□□□□ -1.05
CDH1-205ENST00000562836 SGCBQ16585 318 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 ZNF766Q5HY98 468 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 MFSD14BQ5SR56 506 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 PLEKHS1Q5SXH7 462 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 DNASE2BQ8WZ79 361 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 GPKOWQ92917 476 aaPredicted RBP eCLIP8.48□□□□□ -1.05
CDH1-205ENST00000562836 SNX22Q96L94 193 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 C12orf42Q96LP6 360 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 P2RX4Q99571 388 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 CGRRF1Q99675 332 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 LRFN3Q9BTN0 628 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 CPVLQ9H3G5 476 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 RERGLQ9H628 205 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 TMEFF2Q9UIK5 374 aaPredicted RBP8.48□□□□□ -1.05
CDH1-205ENST00000562836 SHANK3Q9BYB0 1731 aa8.48□□□□□ -1.05
CDH1-205ENST00000562836 ZNF670-ZNF695F2Z2N8 137 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 FAAHO00519 579 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 GEMIN2O14893 280 aaKnown RBP8.47□□□□□ -1.05
CDH1-205ENST00000562836 DUX1O43812 170 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 TBX6O95947 436 aaPredicted RBP8.47□□□□□ -1.05
CDH1-205ENST00000562836 CST1P01037 141 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 EDN1P05305 212 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 CD14P08571 375 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 RAB40ALP0C0E4 278 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 CPEP16870 476 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 KITLGP21583 273 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 CASRP41180 1078 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 AVPR1BP47901 424 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 PJVKQ0ZLH3 352 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 DOC2BQ14184 412 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 LILRA6Q6PI73 481 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 OR4K2Q8NGD2 314 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 OR2T27Q8NH04 317 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 ZNF564Q8TBZ8 553 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms