RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 HCAR3P49019 387 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 RPL14P50914 215 aaKnown RBP3.49□□□□□ -1.85
LRRC28-222ENST00000561431 NOVA1P51513 510 aaKnown RBP3.49□□□□□ -1.85
LRRC28-222ENST00000561431 PSMD4P55036 377 aaKnown RBP3.49□□□□□ -1.85
LRRC28-222ENST00000561431 CLDN15P56746 228 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 B3GALT5-AS1P59052 145 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 SLC25A11Q02978 314 aaKnown RBP3.49□□□□□ -1.85
LRRC28-222ENST00000561431 SLC3A1Q07837 685 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 NFATC2Q13469 925 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 SERTAD2Q14140 314 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 GK3PQ14409 553 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 TRAM2Q15035 370 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 GUK1Q16774 197 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 HLA-BQ31612 363 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 PARP15Q460N3 678 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 ZNF876PQ49A33 203 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 CARD16Q5EG05 197 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 OTUD3Q5T2D3 398 aaPredicted RBP3.49□□□□□ -1.85
LRRC28-222ENST00000561431 N4BP2L1Q5TBK1 243 aaPredicted RBP3.49□□□□□ -1.85
LRRC28-222ENST00000561431 STUMQ69YW2 141 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 OR52W1Q6IF63 320 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 ADAM5Q6NVV9 412 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 DCUN1D2Q6PH85 259 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 PGAP1Q75T13 922 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 SMIM15Q7Z3B0 74 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 ZNF546Q86UE3 836 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 LHFPL3Q86UP9 236 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 KCNMB4Q86W47 210 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 SERPINA9Q86WD7 417 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 CRLF3Q8IUI8 442 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 SLC38A6Q8IZM9 456 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 SYS1Q8N2H4 156 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 PARP8Q8N3A8 854 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 MARVELD2Q8N4S9 558 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 RAB42Q8N4Z0 105 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 KLHDC1Q8N7A1 406 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 CHDHQ8NE62 594 aaPredicted RBP3.49□□□□□ -1.85
LRRC28-222ENST00000561431 DDHD1Q8NEL9 900 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 DEFB124Q8NES8 71 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 OR5AU1Q8NGC0 362 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 OR4D5Q8NGN0 318 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 OR4C3Q8NH37 302 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 MRAPQ8TCY5 172 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 OR8D1Q8WZ84 308 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 TMEM45BQ96B21 275 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 PACRGQ96M98 296 aaPredicted RBP3.49□□□□□ -1.85
LRRC28-222ENST00000561431 NSMCE3Q96MG7 304 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 AMDHD1Q96NU7 426 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 TSSK2Q96PF2 358 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 NICN1Q9BSH3 213 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 NDUFAF3Q9BU61 184 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 ZNF426Q9BUY5 554 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 TSSK1BQ9BXA7 367 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 PITPNM3Q9BZ71 974 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 DHX35Q9H5Z1 703 aaKnown RBP3.49□□□□□ -1.85
LRRC28-222ENST00000561431 Q9H8V8 135 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 MARCH7Q9H992 704 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 ASCL3Q9NQ33 180 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 DIABLOQ9NR28 239 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 BATF3Q9NR55 127 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 UVRAGQ9P2Y5 699 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 LHX3Q9UBR4 397 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 CLN8Q9UBY8 286 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 ZNF282Q9UDV7 671 aaPredicted RBP3.49□□□□□ -1.85
LRRC28-222ENST00000561431 EPHA6Q9UF33 1036 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 IL36AQ9UHA7 158 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 KIF25Q9UIL4 384 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 IKZF2Q9UKS7 526 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 ZNF337Q9Y3M9 751 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 TP53BP1Q12888 1972 aaPredicted RBP3.49□□□□□ -1.85
LRRC28-222ENST00000561431 ABCA7Q8IZY2 2146 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 CHD8Q9HCK8 2581 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 TMEM131Q92545 1883 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 A0A0J9YVX5 310 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 SPAARA0A1B0GVQ0 90 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 A0A1W2PQL4 384 aaPredicted RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 TSPAN11A1L157 253 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 MIF4GDA9UHW6 222 aaKnown RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 NPIPA3F8WFD2 350 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 CLDN34H7C241 214 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 KPNA3O00505 521 aaPredicted RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 PROSCO94903 275 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 SCELO95171 688 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 VAMP5O95183 116 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 ETHE1O95571 254 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 EPOP01588 193 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 IGKV3-20P01619 116 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 APOHP02749 345 aaPredicted RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 HIST1H2AGP0C0S8 130 aaPredicted RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 GIMD1P0DJR0 217 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 ADRB3P13945 408 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 CD36P16671 472 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 TSPAN8P19075 237 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 BGNP21810 368 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 HLA-DMAP28067 261 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 GTF2E2P29084 291 aaKnown RBP3.48□□□□□ -1.85
LRRC28-222ENST00000561431 PPP2R1BP30154 601 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 AQP2P41181 271 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 RGRP47804 291 aa3.48□□□□□ -1.85
LRRC28-222ENST00000561431 DUSP3P51452 185 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms