RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 VASH1Q7L8A9 365 aaPredicted RBP15.05■□□□□ -0
HDDC3-205ENST00000559898 ZER1Q7Z7L7 766 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.05■□□□□ -0
HDDC3-205ENST00000559898 CYP4Z1Q86W10 505 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 C19orf24Q9BVV8 132 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 NUAK2Q9H093 628 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 ANKRD19PQ9H560 264 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 NKIRAS2Q9NYR9 191 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 EIF3KQ9UBQ5 218 aaKnown RBP15.05■□□□□ -0
HDDC3-205ENST00000559898 KLHL21Q9UJP4 597 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 STARD10Q9Y365 291 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 WIPI2Q9Y4P8 454 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 DYSFO75923 2080 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 ANK2Q01484 3957 aa15.04■□□□□ -0
HDDC3-205ENST00000559898 TPD52L2O43399 206 aaKnown RBP15.04■□□□□ -0
HDDC3-205ENST00000559898 NDUFB2O95178 105 aa15.04■□□□□ -0
HDDC3-205ENST00000559898 GCH1P30793 250 aa15.04■□□□□ -0
HDDC3-205ENST00000559898 SDHAP31040 664 aa15.04■□□□□ -0
HDDC3-205ENST00000559898 C1orf94Q6P1W5 598 aa15.04■□□□□ -0
HDDC3-205ENST00000559898 RRM2BQ7LG56 351 aa15.04■□□□□ -0
HDDC3-205ENST00000559898 LRRC37BQ96QE4 947 aa15.04■□□□□ -0
HDDC3-205ENST00000559898 GPX7Q96SL4 187 aaPredicted RBP15.04■□□□□ -0
HDDC3-205ENST00000559898 SAP30LQ9HAJ7 183 aa15.04■□□□□ -0
HDDC3-205ENST00000559898 VSX1Q9NZR4 365 aaPredicted RBP15.04■□□□□ -0
HDDC3-205ENST00000559898 TMEM5Q9Y2B1 443 aa15.04■□□□□ -0
HDDC3-205ENST00000559898 GMNCA6NCL1 334 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 C12orf71A8MTZ7 269 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 B4DSR2 109 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 XKRYO14609 159 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 ARPC2O15144 300 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 RER1O15258 196 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 ICMTO60725 284 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 RGS9O75916 674 aaPredicted RBP15.03■□□□□ -0
HDDC3-205ENST00000559898 UBOX5O94941 541 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 MSMBP08118 114 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 NR2C1P13056 603 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 HNF1AP20823 631 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 HTR5AP47898 357 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 PRSS12P56730 875 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 GNGT1P63211 74 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 SPIBQ01892 262 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 PCGF3Q3KNV8 242 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 FNDC8Q8TC99 324 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 TMEM186Q96B77 213 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 PYURFQ96I23 114 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 CDRT15Q96T59 188 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 FN3KQ9H479 309 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 ZNF665Q9H7R5 613 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 GORASP2Q9H8Y8 452 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 DECR2Q9NUI1 292 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 ASH2LQ9UBL3 628 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 SAMD4AQ9UPU9 718 aaKnown RBP15.03■□□□□ -0
HDDC3-205ENST00000559898 GRIP1Q9Y3R0 1128 aa15.03■□□□□ -0
HDDC3-205ENST00000559898 FAM32AQ9Y421 112 aaKnown RBP15.03■□□□□ -0
HDDC3-205ENST00000559898 ATP8B1O43520 1251 aa15.02■□□□□ -0
HDDC3-205ENST00000559898 SGCEO43556 437 aa15.02■□□□□ -0
HDDC3-205ENST00000559898 ABHD16AO95870 558 aa15.02■□□□□ -0
HDDC3-205ENST00000559898 HSD17B1P14061 328 aa15.02■□□□□ -0
HDDC3-205ENST00000559898 ITGA2P17301 1181 aa15.02■□□□□ -0
HDDC3-205ENST00000559898 ANOS1P23352 680 aa15.02■□□□□ -0
HDDC3-205ENST00000559898 SRP14P37108 136 aaKnown RBP15.02■□□□□ -0
HDDC3-205ENST00000559898 PCBD1P61457 104 aa15.02■□□□□ -0
HDDC3-205ENST00000559898 HLXQ14774 488 aaPredicted RBP15.02■□□□□ -0
HDDC3-205ENST00000559898 CORO6Q6QEF8 472 aa15.02■□□□□ -0
HDDC3-205ENST00000559898 CPLX4Q7Z7G2 160 aa15.02■□□□□ -0
HDDC3-205ENST00000559898 SYT9Q86SS6 491 aa15.02■□□□□ -0
HDDC3-205ENST00000559898 GLCCI1Q86VQ1 547 aa15.02■□□□□ -0
HDDC3-205ENST00000559898 ALDH16A1Q8IZ83 802 aa15.02■□□□□ -0
HDDC3-205ENST00000559898 CCL17Q92583 94 aa15.02■□□□□ -0
HDDC3-205ENST00000559898 G6PC2Q9NQR9 355 aa15.02■□□□□ -0
HDDC3-205ENST00000559898 GPR160Q9UJ42 338 aa15.02■□□□□ -0
HDDC3-205ENST00000559898 AURKCQ9UQB9 309 aa15.02■□□□□ -0
HDDC3-205ENST00000559898 OR6C6A6NF89 314 aa15.01□□□□□ -0.01
HDDC3-205ENST00000559898 PLPP2O43688 288 aa15.01□□□□□ -0.01
HDDC3-205ENST00000559898 KHDRBS3O75525 346 aaKnown RBP15.01□□□□□ -0.01
HDDC3-205ENST00000559898 TXNDC12O95881 172 aa15.01□□□□□ -0.01
HDDC3-205ENST00000559898 IGHV2-5P01817 119 aa15.01□□□□□ -0.01
HDDC3-205ENST00000559898 TFP02787 698 aa15.01□□□□□ -0.01
HDDC3-205ENST00000559898 THBS2P35442 1172 aa15.01□□□□□ -0.01
HDDC3-205ENST00000559898 GUCA1AP43080 201 aaPredicted RBP15.01□□□□□ -0.01
HDDC3-205ENST00000559898 PPP1R8Q12972 351 aaKnown RBP15.01□□□□□ -0.01
HDDC3-205ENST00000559898 RSPO1Q2MKA7 263 aaPredicted RBP15.01□□□□□ -0.01
HDDC3-205ENST00000559898 DPY19L2P2Q6ZN68 376 aa15.01□□□□□ -0.01
HDDC3-205ENST00000559898 PIGWQ7Z7B1 504 aa15.01□□□□□ -0.01
HDDC3-205ENST00000559898 PGAM4Q8N0Y7 254 aa15.01□□□□□ -0.01
HDDC3-205ENST00000559898 FANK1Q8TC84 345 aa15.01□□□□□ -0.01
HDDC3-205ENST00000559898 CMBLQ96DG6 245 aa15.01□□□□□ -0.01
HDDC3-205ENST00000559898 SAMD8Q96LT4 415 aa15.01□□□□□ -0.01
HDDC3-205ENST00000559898 ERMAPQ96PL5 475 aaPredicted RBP15.01□□□□□ -0.01
HDDC3-205ENST00000559898 NMNAT3Q96T66 252 aa15.01□□□□□ -0.01
HDDC3-205ENST00000559898 OR52D1Q9H346 318 aa15.01□□□□□ -0.01
HDDC3-205ENST00000559898 METTL17Q9H7H0 456 aaPredicted RBP15.01□□□□□ -0.01
HDDC3-205ENST00000559898 SRA1Q9HD15 236 aaKnown RBP15.01□□□□□ -0.01
HDDC3-205ENST00000559898 PLEK2Q9NYT0 353 aa15.01□□□□□ -0.01
HDDC3-205ENST00000559898 LHFPL6Q9Y693 200 aa15.01□□□□□ -0.01
HDDC3-205ENST00000559898 LOC105371242A0A075B767 164 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 IGLV1-36A0A0B4J1U3 117 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 NDUFAB1O14561 156 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 TIMM8AO60220 97 aaPredicted RBP15□□□□□ -0.01
HDDC3-205ENST00000559898 GADD45GO95257 159 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms