RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 KLHL28Q9NXS3 571 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 SLC2A8Q9NY64 477 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 SLC7A8Q9UHI5 535 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 SIGLEC9Q9Y336 463 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 FAM47DPA6NHR8 397 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 ZNF716A6NP11 495 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 PSTPIP1O43586 416 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 CST1P01037 141 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 TPM2P07951 284 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 UQCRFS1P1P0C7P4 283 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 ZNF735P0CB33 412 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 IFNA8P32881 189 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 KRTAP12-4P60329 112 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 IDI1Q13907 227 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 CCNJQ5T5M9 372 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 CCDC183Q5T5S1 534 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 ZFP1Q6P2D0 407 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 RNASEKQ6P5S7 137 aaKnown RBP1.68□□□□□ -2.14
VPS13C-207ENST00000558919 TMEM107Q6UX40 140 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 MIR7-3HGQ8N6C7 128 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 SPATA4Q8NEY3 305 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 OR4K5Q8NGD3 323 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 LILRB4Q8NHJ6 448 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 GPR151Q8TDV0 419 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 PIBF1Q8WXW3 757 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 FLYWCH2Q96CP2 140 aaKnown RBP1.68□□□□□ -2.14
VPS13C-207ENST00000558919 RASD2Q96D21 266 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 CNDP1Q96KN2 507 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 TEKT3Q9BXF9 490 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 ILKAPQ9H0C8 392 aaPredicted RBP1.68□□□□□ -2.14
VPS13C-207ENST00000558919 PISDQ9UG56 409 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 ADGRL1O94910 1474 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 SCN4AP35499 1836 aa1.68□□□□□ -2.14
VPS13C-207ENST00000558919 GOLGA8OA6NCC3 632 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 F6UB75 175 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 GOLGA8NF8WBI6 632 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 GOSR2O14653 212 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 CHST1O43916 411 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 CIB2O75838 187 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 SERPIND1P05546 499 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 TROVE2P10155 538 aaKnown RBP eCLIP1.67□□□□□ -2.14
VPS13C-207ENST00000558919 GPX6P59796 221 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 MRPS22P82650 360 aaKnown RBP1.67□□□□□ -2.14
VPS13C-207ENST00000558919 PPP1R7Q15435 360 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 ORMDL2Q53FV1 153 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 AP1ARQ63HQ0 302 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 SAXO2Q658L1 398 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 TMEM205Q6UW68 189 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 FBXW12Q6X9E4 464 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 OR56B2PQ8NGI1 322 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 OR9A2Q8NGT5 310 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 RHEBL1Q8TAI7 183 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 RAB3IL1Q8TBN0 382 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 CCDC77Q9BR77 488 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 PSMC3IPQ9P2W1 217 aaPredicted RBP1.67□□□□□ -2.14
VPS13C-207ENST00000558919 ZNF229Q9UJW7 825 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 NUP50Q9UKX7 468 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 STARD10Q9Y365 291 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 TMED5Q9Y3A6 229 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 CSDC2Q9Y534 153 aaKnown RBP1.67□□□□□ -2.14
VPS13C-207ENST00000558919 NLRC5Q86WI3 1866 aa1.67□□□□□ -2.14
VPS13C-207ENST00000558919 MAPK8IP3Q9UPT6 1336 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 HEATR9A2RTY3 570 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 SOCS1O15524 211 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 WBP4O75554 376 aaKnown RBP1.66□□□□□ -2.14
VPS13C-207ENST00000558919 CBR3O75828 277 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 ZNF43P17038 809 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 TNNI1P19237 187 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 CHMLP26374 656 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 SSTR5P35346 364 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 KIR3DL2P43630 455 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 TNNT2P45379 298 aaPredicted RBP1.66□□□□□ -2.14
VPS13C-207ENST00000558919 PRMT2P55345 433 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 KRTAP12-3P60328 96 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 TWF1Q12792 350 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 TGFBIQ15582 683 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 VPS26BQ4G0F5 336 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 PTPN20Q4JDL3 420 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 ARMC12Q5T9G4 340 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 PLET1Q6UQ28 207 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 CCDC73Q6ZRK6 1079 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 PLPPR1Q8TBJ4 325 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 MRGPRFQ96AM1 343 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 NUP58Q9BVL2 599 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 PLA2G12AQ9BZM1 189 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 DCAF16Q9NXF7 216 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 CAMTA1Q9Y6Y1 1673 aa1.66□□□□□ -2.14
VPS13C-207ENST00000558919 TRAV6A0A075B6T7 132 aa1.65□□□□□ -2.15
VPS13C-207ENST00000558919 IGHV1OR15-9A0A0B4J2B8 117 aa1.65□□□□□ -2.15
VPS13C-207ENST00000558919 LGALS9O00182 355 aa1.65□□□□□ -2.15
VPS13C-207ENST00000558919 MRPS12O15235 138 aaKnown RBP1.65□□□□□ -2.15
VPS13C-207ENST00000558919 IL1RNP18510 177 aa1.65□□□□□ -2.15
VPS13C-207ENST00000558919 COL8A2P25067 703 aa1.65□□□□□ -2.15
VPS13C-207ENST00000558919 HNRNPH3P31942 346 aaKnown RBP1.65□□□□□ -2.15
VPS13C-207ENST00000558919 SSR4P51571 173 aa1.65□□□□□ -2.15
VPS13C-207ENST00000558919 ACLYP53396 1101 aa1.65□□□□□ -2.15
VPS13C-207ENST00000558919 ECH1Q13011 328 aa1.65□□□□□ -2.15
VPS13C-207ENST00000558919 IFT88Q13099 833 aa1.65□□□□□ -2.15
VPS13C-207ENST00000558919 XKR7Q5GH72 579 aa1.65□□□□□ -2.15
VPS13C-207ENST00000558919 METTL21CQ5VZV1 264 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms