RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ABCD2Q9UBJ2 740 aa11.45□□□□□ -0.58
VPS18-203ENST00000558855 GRIP1Q9Y3R0 1128 aa11.45□□□□□ -0.58
VPS18-203ENST00000558855 PRSS37A4D1T9 235 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 A6NIZ1 184 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 SOCS2O14508 198 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 IGHV2-70P01814 119 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 CD55P08174 381 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 EPHA1P21709 976 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 RPL4P36578 427 aaKnown RBP11.44□□□□□ -0.58
VPS18-203ENST00000558855 MDH1P40925 334 aaKnown RBP11.44□□□□□ -0.58
VPS18-203ENST00000558855 CDKN2AP42771 156 aaKnown RBP11.44□□□□□ -0.58
VPS18-203ENST00000558855 HTR5AP47898 357 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 PRSS12P56730 875 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 RAP1BP61224 184 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 RAP1AP62834 184 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 LCN2P80188 198 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 MEP1BQ16820 701 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 HFEQ30201 348 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 FAM209AQ5JX71 171 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 FAM205BPQ63HN1 556 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 FKBP9P1Q75LS8 142 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 ARPINQ7Z6K5 226 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 SIGLEC11Q96RL6 698 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 SLC6A7Q99884 636 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 MYLK2Q9H1R3 596 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 NRIP3Q9NQ35 241 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 MMP26Q9NRE1 261 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 EIF3KQ9UBQ5 218 aaKnown RBP11.44□□□□□ -0.58
VPS18-203ENST00000558855 GPR160Q9UJ42 338 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 PURGQ9UJV8 347 aaKnown RBP11.44□□□□□ -0.58
VPS18-203ENST00000558855 COA3Q9Y2R0 106 aaPredicted RBP11.44□□□□□ -0.58
VPS18-203ENST00000558855 V9GYQ6 96 aa11.44□□□□□ -0.58
VPS18-203ENST00000558855 ISPDA4D126 451 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 OR6C6A6NF89 314 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 C12orf71A8MTZ7 269 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 HAX1O00165 279 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 GSTA4O15217 222 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 SGCEO43556 437 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 SLC16A7O60669 478 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 ABHD16AO95870 558 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 SEMG1P04279 462 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 PSME3P61289 254 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 TNFAIP6P98066 277 aaPredicted RBP11.43□□□□□ -0.58
VPS18-203ENST00000558855 HOXA4Q00056 320 aaPredicted RBP11.43□□□□□ -0.58
VPS18-203ENST00000558855 CDK5R2Q13319 367 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 RSPO1Q2MKA7 263 aaPredicted RBP11.43□□□□□ -0.58
VPS18-203ENST00000558855 C1orf94Q6P1W5 598 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 HACD2Q6Y1H2 254 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 C1QL2Q7Z5L3 287 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 RNF113BQ8IZP6 322 aaKnown RBP11.43□□□□□ -0.58
VPS18-203ENST00000558855 ITLN1Q8WWA0 313 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 C22orf15Q8WYQ4 148 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 FAM162AQ96A26 154 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 ELMOD3Q96FG2 381 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 RSRC1Q96IZ7 334 aaKnown RBP11.43□□□□□ -0.58
VPS18-203ENST00000558855 DHRS1Q96LJ7 313 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 DCLRE1CQ96SD1 692 aaKnown RBP11.43□□□□□ -0.58
VPS18-203ENST00000558855 GAL3ST1Q99999 423 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 KCTD14Q9BQ13 255 aaPredicted RBP11.43□□□□□ -0.58
VPS18-203ENST00000558855 RERGLQ9H628 205 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 MRGBPQ9NV56 204 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 UBAP1Q9NZ09 502 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 VSX1Q9NZR4 365 aaPredicted RBP11.43□□□□□ -0.58
VPS18-203ENST00000558855 ASH2LQ9UBL3 628 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 GRHPRQ9UBQ7 328 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 IER3IP1Q9Y5U9 82 aa11.43□□□□□ -0.58
VPS18-203ENST00000558855 HTR3EA5X5Y0 456 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 GMNCA6NCL1 334 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 H0YL77 283 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 TRAPPC2LH3BP13 241 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 RER1O15258 196 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 TIMM8AO60220 97 aaPredicted RBP11.42□□□□□ -0.58
VPS18-203ENST00000558855 PPP1R3DO95685 299 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 H1F0P07305 194 aaKnown RBP11.42□□□□□ -0.58
VPS18-203ENST00000558855 COX5BP10606 129 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 PSKH1P11801 424 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 NR2C1P13056 603 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 PCMT1P22061 227 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 CFPP27918 469 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 TEKQ02763 1124 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 HLXQ14774 488 aaPredicted RBP11.42□□□□□ -0.58
VPS18-203ENST00000558855 ZMYND11Q15326 602 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 MTX3Q5HYI7 312 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 FGD3Q5JSP0 725 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 SHQ1Q6PI26 577 aaKnown RBP11.42□□□□□ -0.58
VPS18-203ENST00000558855 CORO6Q6QEF8 472 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 SYT9Q86SS6 491 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 OR5AS1Q8N127 324 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 OR52J3Q8NH60 311 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 FNDC8Q8TC99 324 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 RAB39BQ96DA2 213 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 CMBLQ96DG6 245 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 GPX7Q96SL4 187 aaPredicted RBP11.42□□□□□ -0.58
VPS18-203ENST00000558855 HOPXQ9BPY8 73 aaPredicted RBP11.42□□□□□ -0.58
VPS18-203ENST00000558855 NUAK2Q9H093 628 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 FN3KQ9H479 309 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 PTTG3PQ9NZH4 202 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 LHFPL6Q9Y693 200 aa11.42□□□□□ -0.58
VPS18-203ENST00000558855 IGLV1-36A0A0B4J1U3 117 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 IGHV3-64DA0A0J9YX35 117 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms