RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 TEX13CA0A0J9YWL9 993 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 CDC42EP2O14613 210 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 SGCEO43556 437 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 DEAF1O75398 565 aaPredicted RBP13.17□□□□□ -0.3
TPM1-211ENST00000558314 NUDT2P50583 147 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 SLC3A1Q07837 685 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 PSG7Q13046 419 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 ZBED5Q49AG3 693 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 ZMAT1Q5H9K5 638 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 MBOAT2Q6ZWT7 520 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 TREML1Q86YW5 311 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 BPIFB2Q8N4F0 458 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 SEMA6DQ8NFY4 1073 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 SLC7A6Q92536 515 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 GCDHQ92947 438 aaPredicted RBP13.17□□□□□ -0.3
TPM1-211ENST00000558314 SLC6A7Q99884 636 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 KCTD14Q9BQ13 255 aaPredicted RBP13.17□□□□□ -0.3
TPM1-211ENST00000558314 TMPRSS13Q9BYE2 586 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 PLEK2Q9NYT0 353 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 POLR1DQ9Y2S0 133 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 AP3M1Q9Y2T2 418 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 FAM32AQ9Y421 112 aaKnown RBP13.17□□□□□ -0.3
TPM1-211ENST00000558314 NBEAL1Q6ZS30 2694 aa13.17□□□□□ -0.3
TPM1-211ENST00000558314 A0A0A6YYJ9 748 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 HTR3EA5X5Y0 456 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 NME4O00746 187 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 SLC16A7O60669 478 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 UBOX5O94941 541 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 CD14P08571 375 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 CTLA4P16410 223 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 TNFSF4P23510 183 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 LIPAP38571 399 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 GSK3BP49841 420 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 SCRN3Q0VDG4 424 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 KRR1Q13601 381 aaKnown RBP13.16□□□□□ -0.3
TPM1-211ENST00000558314 FHL1Q13642 323 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 MESTQ5EB52 335 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 CBLL1Q75N03 491 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 RNF113BQ8IZP6 322 aaKnown RBP13.16□□□□□ -0.3
TPM1-211ENST00000558314 OR5AS1Q8N127 324 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 TEX29Q8N6K0 151 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 CMBLQ96DG6 245 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 EGFL7Q9UHF1 273 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 ZDHHC8Q9ULC8 765 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 V9GYQ6 96 aa13.16□□□□□ -0.3
TPM1-211ENST00000558314 TRIM77I1YAP6 450 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 SOCS2O14508 198 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 IMPA2O14732 288 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 DIRAS1O95057 198 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 ZNF26P17031 533 aaPredicted RBP13.15□□□□□ -0.3
TPM1-211ENST00000558314 CFPP27918 469 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 ANKDD1AQ495B1 522 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 HSP90B2PQ58FF3 399 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 FOXL2NBQ6ZUU3 175 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 C1QL2Q7Z5L3 287 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 ZER1Q7Z7L7 766 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 C3orf56Q8N813 242 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 ATG16L2Q8NAA4 619 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 OR52J3Q8NH60 311 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 NANPQ8TBE9 248 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 DIRC2Q96SL1 478 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 SYT4Q9H2B2 425 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 EFCAB1Q9HAE3 211 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 NMNAT1Q9HAN9 279 aaPredicted RBP13.15□□□□□ -0.3
TPM1-211ENST00000558314 PTTG3PQ9NZH4 202 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 ASH2LQ9UBL3 628 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 PURGQ9UJV8 347 aaKnown RBP13.15□□□□□ -0.3
TPM1-211ENST00000558314 AURKCQ9UQB9 309 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 TMEM5Q9Y2B1 443 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 COA3Q9Y2R0 106 aaPredicted RBP13.15□□□□□ -0.3
TPM1-211ENST00000558314 STARD10Q9Y365 291 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 IER3IP1Q9Y5U9 82 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 NPTNQ9Y639 398 aa13.15□□□□□ -0.3
TPM1-211ENST00000558314 IGHV3-64DA0A0J9YX35 117 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 PRSS37A4D1T9 235 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 SLC22A2O15244 555 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 CCDC22O60826 627 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 KHDRBS3O75525 346 aaKnown RBP13.14□□□□□ -0.31
TPM1-211ENST00000558314 NDUFB2O95178 105 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 GPANK1O95872 356 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 H1F0P07305 194 aaKnown RBP13.14□□□□□ -0.31
TPM1-211ENST00000558314 ERFP50548 548 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 TMPRSS11FQ6ZWK6 438 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 VASH1Q7L8A9 365 aaPredicted RBP13.14□□□□□ -0.31
TPM1-211ENST00000558314 SYT9Q86SS6 491 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 C1orf174Q8IYL3 243 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 NPEPL1Q8NDH3 523 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 ITLN1Q8WWA0 313 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 RSRC1Q96IZ7 334 aaKnown RBP13.14□□□□□ -0.31
TPM1-211ENST00000558314 JMJD8Q96S16 334 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 HOPXQ9BPY8 73 aaPredicted RBP13.14□□□□□ -0.31
TPM1-211ENST00000558314 SUCNR1Q9BXA5 334 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 TMEM106BQ9NUM4 274 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 CGGBP1Q9UFW8 167 aaPredicted RBP13.14□□□□□ -0.31
TPM1-211ENST00000558314 RPS6KA6Q9UK32 745 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 ENPP4Q9Y6X5 453 aa13.14□□□□□ -0.31
TPM1-211ENST00000558314 WNK2Q9Y3S1 2297 aa13.13□□□□□ -0.31
TPM1-211ENST00000558314 H3BSA7 217 aa13.13□□□□□ -0.31
TPM1-211ENST00000558314 J3QLI3 93 aa13.13□□□□□ -0.31
TPM1-211ENST00000558314 GMNNO75496 209 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms