RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 SLC22A13Q9Y226 551 aa18■□□□□ 0.47
SNRPA1-205ENST00000558036 SLC22A20A6NK97 555 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 GPR171O14626 319 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 DOK2O60496 412 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 MSR1P21757 451 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 OPRL1P41146 370 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 KIR3DL2P43630 455 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 KCNMB1Q16558 191 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 ZNF404Q494X3 552 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 TMEM45BQ96B21 275 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 C1orf198Q9H425 327 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 CCDC59Q9P031 241 aaKnown RBP17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 EMC3Q9P0I2 261 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 CASKO14936 926 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 ID4P47928 161 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 ZNF84P51523 738 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 BMXP51813 675 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 HNRNPA0Q13151 305 aaKnown RBP17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 TRAM1Q15629 374 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 ZMAT1Q5H9K5 638 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 MCEMP1Q8IX19 187 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 OR5AK2Q8NH90 309 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 C4orf45Q96LM5 186 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 PRDM14Q9GZV8 571 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 BCO1Q9HAY6 547 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 BRD7Q9NPI1 651 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 ZNF71Q9NQZ8 489 aaPredicted RBP17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 ZNF281Q9Y2X9 895 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 EMC9Q9Y3B6 208 aa17.99■□□□□ 0.47
SNRPA1-205ENST00000558036 OR4C45A6NMZ5 311 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 IL1AP01583 271 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 H2BFMP0C1H6 154 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 GALP22466 123 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 SOX6P35712 828 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 ROR2Q01974 943 aaKnown RBP17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 ENDOGQ14249 297 aaKnown RBP17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 CEACAM16Q2WEN9 425 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 OR10AC1Q8NH08 325 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 SLC25A46Q96AG3 418 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 PTPRQQ9UMZ3 2332 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 A0A1B0GVC2 190 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 ACOD1A6NK06 481 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 AQP7O14520 342 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 KRT33AO76009 404 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 YES1P07947 543 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 ADRB1P08588 477 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 B4GALT1P15291 398 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 FOXL2NBQ6ZUU3 175 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 NUFIP2Q7Z417 695 aaKnown RBP17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 ZNF676Q8N7Q3 588 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 OR51A4Q8NGJ6 313 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 SH3GL3Q99963 347 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 SLCO5A1Q9H2Y9 848 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 SLC7A10Q9NS82 523 aa17.98■□□□□ 0.47
SNRPA1-205ENST00000558036 GPRIN2O60269 458 aa17.97■□□□□ 0.47
SNRPA1-205ENST00000558036 CXADRP78310 365 aa17.97■□□□□ 0.47
SNRPA1-205ENST00000558036 MRPL28Q13084 256 aaKnown RBP17.97■□□□□ 0.47
SNRPA1-205ENST00000558036 RNPS1Q15287 305 aaKnown RBP17.97■□□□□ 0.47
SNRPA1-205ENST00000558036 C9orf135Q5VTT2 229 aa17.97■□□□□ 0.47
SNRPA1-205ENST00000558036 SYT9Q86SS6 491 aa17.97■□□□□ 0.47
SNRPA1-205ENST00000558036 GPR35Q9HC97 309 aa17.97■□□□□ 0.47
SNRPA1-205ENST00000558036 PLSCR2Q9NRY7 297 aa17.97■□□□□ 0.47
SNRPA1-205ENST00000558036 CD1AP06126 327 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 RORCP51449 518 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 TMPRSS3P57727 454 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 NR2C2APQ86WQ0 139 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 EGFL6Q8IUX8 553 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 IL17RDQ8NFM7 739 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 DACH2Q96NX9 599 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 TRIB1Q96RU8 372 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 C12orf49Q9H741 205 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 PNRC2Q9NPJ4 139 aaKnown RBP17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 TMEM38BQ9NVV0 291 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 ZNF724A8MTY0 619 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 C1QTNF9BB2RNN3 333 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 SRSF10O75494 262 aaKnown RBP17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 C1QTNF9P0C862 333 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 SOX2P48431 317 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 LSM6P62312 80 aaKnown RBP17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 MRPS34P82930 218 aaKnown RBP17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 YIF1BQ5BJH7 314 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 OR6Q1Q8NGQ2 317 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 CPT1CQ8TCG5 803 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 FBXO17Q96EF6 278 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 MED18Q9BUE0 208 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 NXF2Q9GZY0 626 aaKnown RBP17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 B3GAT2Q9NPZ5 323 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 PARPBPQ9NWS1 579 aa17.96■□□□□ 0.47
SNRPA1-205ENST00000558036 TMEM269A0A1B0GVZ9 245 aa17.95■□□□□ 0.46
SNRPA1-205ENST00000558036 HSPB2A8KAH6 182 aa17.95■□□□□ 0.46
SNRPA1-205ENST00000558036 SERPINA3P01011 423 aa17.95■□□□□ 0.46
SNRPA1-205ENST00000558036 INHBBP09529 407 aa17.95■□□□□ 0.46
SNRPA1-205ENST00000558036 FAM87AP0C7U9 286 aa17.95■□□□□ 0.46
SNRPA1-205ENST00000558036 FOXG1P55316 489 aaPredicted RBP17.95■□□□□ 0.46
SNRPA1-205ENST00000558036 HSPB2Q16082 182 aa17.95■□□□□ 0.46
SNRPA1-205ENST00000558036 RIPPLY2Q5TAB7 128 aa17.95■□□□□ 0.46
SNRPA1-205ENST00000558036 CATSPERDQ86XM0 798 aa17.95■□□□□ 0.46
SNRPA1-205ENST00000558036 GCNT2Q8N0V5 402 aa17.95■□□□□ 0.46
SNRPA1-205ENST00000558036 HAVCR2Q8TDQ0 301 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms