RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 CMC2Q9NRP2 79 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 C14orf105Q9NVL8 296 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 HAO2Q9NYQ3 351 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 CNIH4Q9P003 139 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 TAC3Q9UHF0 121 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 ACSL5Q9ULC5 683 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 SPATA2Q9UM82 520 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 MTCL1Q9Y4B5 1905 aaKnown RBP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 PIKFYVEQ9Y2I7 2098 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 hDV102S1A0JD36 115 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 TRAPPC13A5PLN9 417 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 MFSD2BA6NFX1 497 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 HMSDA8MTL9 139 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 GPR89AB7ZAQ6 455 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 GABARAPH6UMI1 98 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 J3QLW9 94 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 RTCAO00442 366 aaKnown RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 KPNA3O00505 521 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 OGG1O15527 345 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 OR1F1O43749 312 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 CREBL2O60519 120 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 RP2O75695 350 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 KRT33AO76009 404 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 AQP8O94778 261 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 MPC2O95563 127 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 LDOC1O95751 146 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 EPPINO95925 133 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 AK1P00568 194 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 TFP02787 698 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 ATP1B1P05026 303 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 HMGN2P05204 90 aaKnown RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 HOXD4P09016 255 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 CD3GP09693 182 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 UCHL1P09936 223 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 ACSM4P0C7M7 580 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 GPR89BP0CG08 455 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 PRG2P13727 222 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 ZNF250P15622 560 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 ZNF19P17023 458 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 CXCL3P19876 107 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 NT5EP21589 574 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 CALCRP30988 508 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 CTNNB1P35222 781 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 FAUP35544 74 aaKnown RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 AHRP35869 848 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 ARL3P36405 182 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 SRP9P49458 86 aaKnown RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 METAP1P53582 386 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 GMFBP60983 142 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 ST8SIA6P61647 398 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 LGALS3BPQ08380 585 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 FUT5Q11128 374 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 MYBPHQ13203 477 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 LASP1Q14847 261 aaKnown RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 SHHQ15465 462 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 POM121L1PQ3SYA9 428 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 ACSM3Q53FZ2 586 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 NHLRC3Q5JS37 347 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 TCTE1Q5JU00 501 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 C9orf64Q5T6V5 341 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 PIP5KL1Q5T9C9 394 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 RPUSD3Q6P087 351 aaKnown RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 SLC48A1Q6P1K1 146 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 PLBD1Q6P4A8 553 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 ARHGAP11AQ6P4F7 1023 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 RPL22L1Q6P5R6 122 aaKnown RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 KLHL24Q6TFL4 600 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 PRSS57Q6UWY2 283 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 GLDNQ6ZMI3 551 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 CHMP1BQ7LBR1 199 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 COMTD1Q86VU5 262 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 AMZ2Q86W34 360 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 NR2C2APQ86WQ0 139 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 EIF4E3Q8N5X7 224 aaKnown RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 TMEM99Q8N816 258 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 POMGNT2Q8NAT1 580 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 TMEM116Q8NCL8 245 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 BBS1Q8NFJ9 593 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 OR10H4Q8NGA5 316 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 OR6C4Q8NGE1 309 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 OR5T2Q8NGG2 359 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 OR5K2Q8NHB8 316 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 ZNF671Q8TAW3 534 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 ING5Q8WYH8 240 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 NSMAFQ92636 917 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 TFGQ92734 400 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 SGTBQ96EQ0 304 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 ELMOD3Q96FG2 381 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 C12orf66Q96MD2 445 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 OR7D2Q96RA2 312 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 WFDC6Q9BQY6 131 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 RSPO3Q9BXY4 272 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 SLITRK2Q9H156 845 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 ABCG4Q9H172 646 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 SLC38A1Q9H2H9 487 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 OR52D1Q9H346 318 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 METTL17Q9H7H0 456 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-246ENST00000557030 LHX9Q9NQ69 397 aa4.19□□□□□ -1.74
ATXN3-246ENST00000557030 CTPS2Q9NRF8 586 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms