RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 GSK3BP49841 420 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 LCN6P62502 163 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 SCGB2A2Q13296 93 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 JMJD1CQ15652 2540 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 ZMAT1Q5H9K5 638 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 FGD3Q5JSP0 725 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 GLYATQ6IB77 296 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 ACSM5Q6NUN0 579 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 ZNF774Q6NX45 483 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 C1orf94Q6P1W5 598 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 ZNF771Q7L3S4 317 aaPredicted RBP6.12□□□□□ -1.43
PCNX1-213ENST00000556846 ZER1Q7Z7L7 766 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 PEG10Q86TG7 708 aaKnown RBP6.12□□□□□ -1.43
PCNX1-213ENST00000556846 TREML1Q86YW5 311 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 ZNF101Q8IZC7 436 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 TEX29Q8N6K0 151 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 LRRC75AQ8NAA5 344 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 KLF14Q8TD94 323 aaPredicted RBP6.12□□□□□ -1.43
PCNX1-213ENST00000556846 GTF3AQ92664 365 aaKnown RBP6.12□□□□□ -1.43
PCNX1-213ENST00000556846 NABP1Q96AH0 204 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 NMD3Q96D46 503 aaKnown RBP6.12□□□□□ -1.43
PCNX1-213ENST00000556846 RAB39BQ96DA2 213 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 CMTM5Q96DZ9 223 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 MARS2Q96GW9 593 aaKnown RBP6.12□□□□□ -1.43
PCNX1-213ENST00000556846 C1orf159Q96HA4 380 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 FAM46AQ96IP4 442 aaKnown RBP6.12□□□□□ -1.43
PCNX1-213ENST00000556846 ZNF570Q96NI8 536 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 LRRC37BQ96QE4 947 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 ELAC2Q9BQ52 826 aaKnown RBP6.12□□□□□ -1.43
PCNX1-213ENST00000556846 OR2J1Q9GZK6 312 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 FAM107BQ9H098 131 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 WNT5BQ9H1J7 359 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 HEATR1Q9H583 2144 aaKnown RBP6.12□□□□□ -1.43
PCNX1-213ENST00000556846 CCDC134Q9H6E4 229 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 ZNF665Q9H7R5 613 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 NMNAT1Q9HAN9 279 aaPredicted RBP6.12□□□□□ -1.43
PCNX1-213ENST00000556846 EMC7Q9NPA0 242 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 KRCC1Q9NPI7 259 aaPredicted RBP6.12□□□□□ -1.43
PCNX1-213ENST00000556846 MED4Q9NPJ6 270 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 ZNF446Q9NWS9 450 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 NKIRAS2Q9NYR9 191 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 ADA2Q9NZK5 511 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 NDRG4Q9ULP0 352 aaKnown RBP6.12□□□□□ -1.43
PCNX1-213ENST00000556846 AURKCQ9UQB9 309 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 TMEM5Q9Y2B1 443 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 NIPBLQ6KC79 2804 aaeCLIP6.11□□□□□ -1.43
PCNX1-213ENST00000556846 TRAV20A0A0B4J274 112 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 CDC42EP2O14613 210 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 AHCYL1O43865 530 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 SLC16A7O60669 478 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 KHDRBS3O75525 346 aaKnown RBP6.11□□□□□ -1.43
PCNX1-213ENST00000556846 RP2O75695 350 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 NDUFB2O95178 105 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 MPZL1O95297 269 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 ABHD16AO95870 558 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 NGFP01138 241 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 IGHV1-46P01743 117 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 IGHMP01871 453 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 CD14P08571 375 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 GSTM3P21266 225 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 TNFSF4P23510 183 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 HTR5AP47898 357 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 PSME3P61289 254 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 LMO4P61968 165 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 TNFAIP6P98066 277 aaPredicted RBP6.11□□□□□ -1.43
PCNX1-213ENST00000556846 SLC3A1Q07837 685 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 SCRN3Q0VDG4 424 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 ENDOGQ14249 297 aaKnown RBP6.11□□□□□ -1.43
PCNX1-213ENST00000556846 FAM209AQ5JX71 171 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 MBNL2Q5VZF2 373 aaKnown RBP6.11□□□□□ -1.43
PCNX1-213ENST00000556846 TMPRSS11FQ6ZWK6 438 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 OR52J3Q8NH60 311 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 IPCEF1Q8WWN9 437 aaPredicted RBP6.11□□□□□ -1.43
PCNX1-213ENST00000556846 MCUR1Q96AQ8 359 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 Q96M85 177 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 DCLRE1CQ96SD1 692 aaKnown RBP6.11□□□□□ -1.43
PCNX1-213ENST00000556846 DIRC2Q96SL1 478 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 GAL3ST1Q99999 423 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 WACQ9BTA9 647 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 RACGAP1Q9H0H5 632 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 ANKRD19PQ9H560 264 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 MSL2Q9HCI7 577 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 SPAG4Q9NPE6 437 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 POLE4Q9NR33 117 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 MAN2C1Q9NTJ4 1040 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 PLEK2Q9NYT0 353 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 UBAP1Q9NZ09 502 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 EGFL7Q9UHF1 273 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 ZDHHC8Q9ULC8 765 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 PCDHB10Q9UN67 800 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 SAMD4AQ9UPU9 718 aaKnown RBP6.11□□□□□ -1.43
PCNX1-213ENST00000556846 COA3Q9Y2R0 106 aaPredicted RBP6.11□□□□□ -1.43
PCNX1-213ENST00000556846 ADAM18Q9Y3Q7 739 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 WIPI2Q9Y4P8 454 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 CACNG2Q9Y698 323 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 ENPP4Q9Y6X5 453 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 ABCA1O95477 2261 aa6.11□□□□□ -1.43
PCNX1-213ENST00000556846 NSD1Q96L73 2696 aaPredicted RBP6.11□□□□□ -1.43
PCNX1-213ENST00000556846 A0A0G2JMP0 313 aa6.1□□□□□ -1.43
PCNX1-213ENST00000556846 TEX13CA0A0J9YWL9 993 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms