RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 TMEM129A0AVI4 362 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 FAM90A27PA6NNH2 459 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 SGCEO43556 437 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 ZNF254O75437 659 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 CLPTM1O96005 669 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 CGAP01215 116 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 ITGA5P08648 1049 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 ATP6V1B1P15313 513 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 PSMB1P20618 241 aaKnown RBP9.83□□□□□ -0.84
SHMT2-220ENST00000555634 NTF4P34130 210 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 UQCRFS1P47985 274 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 RIDAP52758 137 aaKnown RBP9.83□□□□□ -0.84
SHMT2-220ENST00000555634 WNT4P56705 351 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 TUBA4AP68366 448 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 GALEQ14376 348 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 MED22Q15528 200 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 TBRG1Q3YBR2 411 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 SFRP5Q5T4F7 317 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 RNLSQ5VYX0 342 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 ARL9Q6T311 187 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 ZNF322Q6U7Q0 402 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-220ENST00000555634 UNQ6126/PRO20091Q6UXV3 157 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 B3GLCTQ6Y288 498 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 RHOUQ7L0Q8 258 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 ZNF367Q7RTV3 350 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 KCTD20Q7Z5Y7 419 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 EGFL6Q8IUX8 553 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 LINC00346Q8IVM7 164 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 WDFY1Q8IWB7 410 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 ZNF808Q8N4W9 903 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-220ENST00000555634 YIPF7Q8N8F6 280 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 OR52N1Q8NH53 320 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 RORBQ92753 470 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 NABP1Q96AH0 204 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 ATF6BQ99941 703 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 SH3GL3Q99963 347 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 KCNS3Q9BQ31 491 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 CDCA4Q9BXL8 241 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 OR10A4Q9H209 315 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 SP140LQ9H930 580 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 NGBQ9NPG2 151 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 MRPL22Q9NWU5 206 aaKnown RBP9.83□□□□□ -0.84
SHMT2-220ENST00000555634 ERVK13-1Q9NX77 482 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 ERVK-18Q9QC07 812 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 CYB5R1Q9UHQ9 305 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 ATPIF1Q9UII2 106 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 GDF2Q9UK05 429 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-220ENST00000555634 CAB39Q9Y376 341 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-220ENST00000555634 MYO7BQ6PIF6 2116 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 ARPC4-TTLL3A0A0A6YYG9 625 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 A0A1W2PQL4 384 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-220ENST00000555634 OR6C6A6NF89 314 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 OR5H1A6NKK0 313 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 A8MXE2 369 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 C16orf97H3BN30 126 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 SULT1C4O75897 302 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 MPZL1O95297 269 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 GPANK1O95872 356 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 TFP02787 698 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 MT-ND2P03891 347 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 APLNRP35414 380 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 HTR5AP47898 357 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 GBX2P52951 348 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-220ENST00000555634 IGFBP7Q16270 282 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 TBC1D28Q2M2D7 210 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 SOWAHCQ53LP3 525 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-220ENST00000555634 ELFN2Q5R3F8 820 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 TIMM23BQ5SRD1 257 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 LAIR2Q6ISS4 152 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 TMEM154Q6P9G4 183 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 DEGS2Q6QHC5 323 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 LYPD4Q6UWN0 246 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 LINGO2Q7L985 606 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 SYS1Q8N2H4 156 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 ZNF433Q8N7K0 673 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-220ENST00000555634 RELL2Q8NC24 303 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-220ENST00000555634 OR1J2Q8NGS2 313 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 SLAMF6Q96DU3 332 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 ABHD6Q9BV23 337 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 ACTR6Q9GZN1 396 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 MOB1AQ9H8S9 216 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 CENPMQ9NSP4 180 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 GTF2A1LQ9UNN4 478 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 LHFPL6Q9Y693 200 aa9.82□□□□□ -0.84
SHMT2-220ENST00000555634 J3QLW9 94 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 NOL3O60936 208 aaKnown RBP9.81□□□□□ -0.84
SHMT2-220ENST00000555634 ZNF19P17023 458 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 ALOX5APP20292 161 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 EDNRAP25101 427 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 SLC6A9P48067 706 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 SORDQ00796 357 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 ENDOGQ14249 297 aaKnown RBP9.81□□□□□ -0.84
SHMT2-220ENST00000555634 NEDD8Q15843 81 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 GABRA6Q16445 453 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 PCK2Q16822 640 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 HIKESHIQ53FT3 197 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 CORO6Q6QEF8 472 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 NCCRP1Q6ZVX7 275 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-220ENST00000555634 LHFPL3Q86UP9 236 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 ZNF679Q8IYX0 411 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms