RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 PERPQ96FX8 193 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 RADILQ96JH8 1075 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 DDOQ99489 341 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 ULBP2Q9BZM5 246 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 NMNAT2Q9BZQ4 307 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 NUAK2Q9H093 628 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 RACGAP1Q9H0H5 632 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 RERGLQ9H628 205 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 MED20Q9H944 212 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 PLCXD1Q9NUJ7 323 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 GLTPQ9NZD2 209 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 AASSQ9UDR5 926 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 A0A087WXM4 84 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 A0A1W2PR80 420 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 A6NHS1 94 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 RPL36A-HNRNPH2H7BZ11 118 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 SLC16A7O60669 478 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 KHDRBS3O75525 346 aaKnown RBP8.39□□□□□ -1.07
ACTN1-215ENST00000555616 UPK3AO75631 287 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 GLCEO94923 617 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 CLPTM1O96005 669 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 GYPBP06028 91 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 DBTP11182 482 aaKnown RBP8.39□□□□□ -1.07
ACTN1-215ENST00000555616 CTLA4P16410 223 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 SLC2A5P22732 501 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 EEF1B2P24534 225 aaKnown RBP8.39□□□□□ -1.07
ACTN1-215ENST00000555616 CD40P25942 277 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 GUCA1AP43080 201 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-215ENST00000555616 ZNF84P51523 738 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 ZNF91Q05481 1191 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 SPOCK1Q08629 439 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 SMN1Q16637 294 aaKnown RBP8.39□□□□□ -1.07
ACTN1-215ENST00000555616 HIST3H3Q16695 136 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 TBRG1Q3YBR2 411 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 HIKESHIQ53FT3 197 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 KLHL22Q53GT1 634 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 KLHL24Q6TFL4 600 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 BCDIN3DQ7Z5W3 292 aaKnown RBP8.39□□□□□ -1.07
ACTN1-215ENST00000555616 DTX2Q86UW9 622 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 OR6V1Q8N148 313 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 ZNF540Q8NDQ6 660 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 BBS1Q8NFJ9 593 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 OR1K1Q8NGR3 316 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 SMAP2Q8WU79 429 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-215ENST00000555616 IPCEF1Q8WWN9 437 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-215ENST00000555616 MYDGFQ969H8 173 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 RNFT2Q96EX2 444 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 COX4I2Q96KJ9 171 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 TEAD3Q99594 435 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 HCAR1Q9BXC0 346 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 NELFAQ9H3P2 528 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 SRA1Q9HD15 236 aaKnown RBP8.39□□□□□ -1.07
ACTN1-215ENST00000555616 CCNB1IP1Q9NPC3 277 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 B9D1Q9UPM9 204 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 MED13LQ71F56 2210 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 PRR14LQ5THK1 2151 aa8.39□□□□□ -1.07
ACTN1-215ENST00000555616 ZNF469Q96JG9 3925 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-215ENST00000555616 NAV3Q8IVL0 2385 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 ARPC4-TTLL3A0A0A6YYG9 625 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 IGLV1-36A0A0B4J1U3 117 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 TRIM64CA6NLI5 447 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 M0R1B8 84 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 XPNPEP2O43895 674 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 FADS2O95864 444 aaKnown RBP8.38□□□□□ -1.07
ACTN1-215ENST00000555616 WNT11O96014 354 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 HLA-DQA2P01906 255 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 QDPRP09417 244 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 CLUP10909 449 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 PIPP12273 146 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-215ENST00000555616 CRHBPP24387 322 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 GSTT1P30711 240 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 PYCR1P32322 319 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 RPL5P46777 297 aaKnown RBP8.38□□□□□ -1.07
ACTN1-215ENST00000555616 GTF2A1P52655 376 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-215ENST00000555616 ROR2Q01974 943 aaKnown RBP8.38□□□□□ -1.07
ACTN1-215ENST00000555616 FMODQ06828 376 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 RAB40BQ12829 278 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 C10orf128Q5T292 105 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 LAIR2Q6ISS4 152 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 ANKRD16Q6P6B7 361 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 B3GLCTQ6Y288 498 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 GLB1L2Q8IW92 636 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 WDFY1Q8IWB7 410 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 OR51L1Q8NGJ5 315 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 NSMAFQ92636 917 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 BCL2L2Q92843 193 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-215ENST00000555616 MCHR2Q969V1 340 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 NMD3Q96D46 503 aaKnown RBP8.38□□□□□ -1.07
ACTN1-215ENST00000555616 ZMYND19Q96E35 227 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-215ENST00000555616 C18orf12Q96KH6 178 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 TSSK2Q96PF2 358 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 CNN2Q99439 309 aaKnown RBP8.38□□□□□ -1.07
ACTN1-215ENST00000555616 TRAF4Q9BUZ4 470 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-215ENST00000555616 CRLF2Q9HC73 371 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 MOV10Q9HCE1 1003 aaKnown RBP8.38□□□□□ -1.07
ACTN1-215ENST00000555616 AMBNQ9NP70 447 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 FAIMQ9NVQ4 179 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 HAO2Q9NYQ3 351 aa8.38□□□□□ -1.07
ACTN1-215ENST00000555616 CISD1Q9NZ45 108 aaKnown RBP8.38□□□□□ -1.07
ACTN1-215ENST00000555616 CNOT2Q9NZN8 540 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms