RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 SMARCB1Q12824 385 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 IFT88Q13099 833 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 RPEL1Q2QD12 228 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 AADACL4Q5VUY2 407 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 GPR107Q5VW38 600 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 ZNF493Q6ZR52 646 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 CAMK2N1Q7Z7J9 78 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 ZNF584Q8IVC4 421 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 STPG2Q8N412 459 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 PDCL2Q8N4E4 241 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 OR4S2Q8NH73 311 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 CD300LFQ8TDQ1 290 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 RDH5Q92781 318 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 RAB1CQ92928 201 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 LZTS2Q9BRK4 669 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 DEFB129Q9H1M3 183 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 LINC00597Q9H2U6 94 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 CD209Q9NNX6 404 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 DDX19BQ9UMR2 479 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 YARS2Q9Y2Z4 477 aaKnown RBP3.46□□□□□ -1.86
SCFD1-209ENST00000553280 ADGRA3Q8IWK6 1321 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 TRAV6A0A075B6T7 132 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 A0A1B0GVY2 172 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 K7EMT4 169 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 XRCC2O43543 280 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 SUPT3HO75486 399 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 TACSTD2P09758 323 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 PNMA6AP0CW24 399 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-209ENST00000553280 ZNF19P17023 458 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 RCC1P18754 421 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-209ENST00000553280 ATF6P18850 670 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 NMUP48645 174 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 CSNK1DP48730 415 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 ZNF33AQ06730 810 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 TCP10Q12799 353 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 PSG7Q13046 419 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 UNC119Q13432 240 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 PSG5Q15238 335 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 HNRNPA1L2Q32P51 320 aaKnown RBP3.45□□□□□ -1.86
SCFD1-209ENST00000553280 C6orf120Q7Z4R8 191 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 ZFP41Q8N8Y5 198 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 LINC01555Q8NAE3 123 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 PIH1D2Q8WWB5 315 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 SEH1LQ96EE3 360 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 MICU1Q9BPX6 476 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 XKR8Q9H6D3 395 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 ADAM22Q9P0K1 906 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 DEC1Q9P2X7 70 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 TP53TG3Q9ULZ0 132 aa3.45□□□□□ -1.86
SCFD1-209ENST00000553280 TP53BP1Q12888 1972 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-209ENST00000553280 IGLV1-36A0A0B4J1U3 117 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 PLAC8L1A1L4L8 177 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 A6NDN8 102 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 HSBP1O75506 76 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 IGLV2-23P01705 113 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 IVLP07476 585 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 RETP07949 1114 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 TPM1P09493 284 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 CCDC172P0C7W6 258 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 GGT1P19440 569 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 RAB3BP20337 219 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 CCNE1P24864 410 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 MAS1LP35410 378 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 NUP62P37198 522 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-209ENST00000553280 PSMD4P55036 377 aaKnown RBP3.44□□□□□ -1.86
SCFD1-209ENST00000553280 WNT4P56705 351 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 KRTAP10-3P60369 221 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 LCN2P80188 198 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 SLC7A9P82251 487 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 HMGCS1Q01581 520 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 STK38Q15208 465 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 TMEM183BQ1AE95 376 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 HSP90AA4PQ58FG1 418 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 THEM4Q5T1C6 240 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 TPTE2P1Q5T6R2 138 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 MLIPQ5VWP3 458 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 ULK3Q6PHR2 472 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 LYPD2Q6UXB3 125 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 MBOAT2Q6ZWT7 520 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 CBLN2Q8IUK8 224 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 TMEM183AQ8IXX5 376 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 TMEM104Q8NE00 496 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 OR52E2Q8NGJ4 325 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 OR51F2Q8NH61 342 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 ITFG1Q8TB96 612 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 IL22RA2Q969J5 263 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 TMEM230Q96A57 120 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 CIDECQ96AQ7 238 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-209ENST00000553280 CREB3L1Q96BA8 519 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 APH1AQ96BI3 265 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 GAL3ST2Q9H3Q3 398 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 DMAP1Q9NPF5 467 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-209ENST00000553280 LZTFL1Q9NQ48 299 aa3.44□□□□□ -1.86
SCFD1-209ENST00000553280 ZNF282Q9UDV7 671 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-209ENST00000553280 LOC100653049A0A140TA62 436 aa3.43□□□□□ -1.86
SCFD1-209ENST00000553280 CIB4A0PJX0 185 aa3.43□□□□□ -1.86
SCFD1-209ENST00000553280 NCBP2LA6PVI3 153 aaKnown RBP3.43□□□□□ -1.86
SCFD1-209ENST00000553280 LAD1O00515 517 aa3.43□□□□□ -1.86
SCFD1-209ENST00000553280 KRT34O76011 436 aa3.43□□□□□ -1.86
SCFD1-209ENST00000553280 OXTP01178 125 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms