RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 ACTR3CQ9C0K3 210 aaPredicted RBP2.06□□□□□ -2.08
CCDC38-208ENST00000549876 ROGDIQ9GZN7 287 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 GAL3ST2Q9H3Q3 398 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 TPK1Q9H3S4 243 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 RNF167Q9H6Y7 350 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 DYRK4Q9NR20 520 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 AIG1Q9NVV5 245 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 HRASLS2Q9NWW9 162 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 CCDC59Q9P031 241 aaKnown RBP2.06□□□□□ -2.08
CCDC38-208ENST00000549876 LRP4O75096 1905 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 CNTNAP1P78357 1384 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 COL22A1Q8NFW1 1626 aaPredicted RBP2.06□□□□□ -2.08
CCDC38-208ENST00000549876 TRAV6A0A075B6T7 132 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 GLYATL1P3A0A0U1RQE8 302 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 LOC100506127A0A0U1RQW1 187 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 LYRM9A8MSI8 78 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 C12orf77C9JDV5 145 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 PSMD11O00231 422 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 ZBTB5O15062 677 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 AGPAT2O15120 278 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 SCAMP2O15127 329 aaKnown RBP2.05□□□□□ -2.08
CCDC38-208ENST00000549876 NVLO15381 856 aaKnown RBP2.05□□□□□ -2.08
CCDC38-208ENST00000549876 YKT6O15498 198 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 KDELR3O43731 214 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 CLDN11O75508 207 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 CD160O95971 181 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 MOSP00540 346 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 IFNW1P05000 195 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 SERPINA5P05154 406 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 CLTAP09496 248 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 CTRB1P17538 263 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 GPR6P46095 362 aaPredicted RBP2.05□□□□□ -2.08
CCDC38-208ENST00000549876 CRISP1P54107 249 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 SELENOTP62341 195 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 IRX3P78415 501 aaPredicted RBP2.05□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF92Q03936 586 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 CDH17Q12864 832 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 TRAM2Q15035 370 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 CYTH1Q15438 398 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 ATP6AP1Q15904 470 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 Q3ZCU0 254 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 KPRPQ5T749 579 aaPredicted RBP2.05□□□□□ -2.08
CCDC38-208ENST00000549876 CTRB2Q6GPI1 263 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 SLC25A25Q6KCM7 469 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 ANKRD26P1Q6NSI1 321 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 ULK3Q6PHR2 472 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 FAM122BQ7Z309 247 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 TRIML2Q8N7C3 387 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 PRELID2Q8N945 189 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 LRRC75AQ8NAA5 344 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 TMEM104Q8NE00 496 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 OR56A4Q8NGH8 313 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 OR13C9Q8NGT0 318 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 OR5K2Q8NHB8 316 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 LILRB4Q8NHJ6 448 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF502Q8TBZ5 544 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 DUS3LQ96G46 650 aaKnown RBP2.05□□□□□ -2.08
CCDC38-208ENST00000549876 ZBED3Q96IU2 234 aaPredicted RBP2.05□□□□□ -2.08
CCDC38-208ENST00000549876 SH3GL3Q99963 347 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 RARRES2Q99969 163 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 ECSITQ9BQ95 431 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 OR2AG1Q9H205 316 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 SIAEQ9HAT2 523 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 ZC4H2Q9NQZ6 224 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 AGPAT3Q9NRZ7 376 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 CALYQ9NYX4 217 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 ING4Q9UNL4 249 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 ASF1AQ9Y294 204 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF835Q9Y2P0 537 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 GOLT1BQ9Y3E0 138 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 MAP3K15Q6ZN16 1313 aa2.05□□□□□ -2.08
CCDC38-208ENST00000549876 C12orf71A8MTZ7 269 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 K7ERQ8 282 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 SIVA1O15304 175 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 POLR3GO15318 223 aaPredicted RBP2.04□□□□□ -2.08
CCDC38-208ENST00000549876 SCELO95171 688 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 FARS2O95363 451 aaKnown RBP2.04□□□□□ -2.08
CCDC38-208ENST00000549876 NPPAP01160 153 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 IGLV3-19P01714 112 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 APOA1P02647 267 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF286BP0CG31 522 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 CT45A6P0DMU7 189 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 CT45A5P0DMU8 189 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 CT45A7P0DMV0 189 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 CD9P21926 228 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 PRKACBP22694 351 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 AK4P27144 223 aaPredicted RBP2.04□□□□□ -2.08
CCDC38-208ENST00000549876 SUB1P53999 127 aaKnown RBP eCLIP2.04□□□□□ -2.08
CCDC38-208ENST00000549876 CRISP3P54108 245 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 PSMD4P55036 377 aaKnown RBP2.04□□□□□ -2.08
CCDC38-208ENST00000549876 ACTA1P68133 377 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 LCN2P80188 198 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 XIAPP98170 497 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 TGFBR3Q03167 851 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 ECH1Q13011 328 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 PDIA2Q13087 525 aaKnown RBP2.04□□□□□ -2.08
CCDC38-208ENST00000549876 ARFRP1Q13795 201 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF829Q3KNS6 432 aaPredicted RBP2.04□□□□□ -2.08
CCDC38-208ENST00000549876 CT45A1Q5HYN5 189 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 GPR107Q5VW38 600 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms