RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 VSIG4Q9Y279 399 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 TMEM218A2RU14 115 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 METTL21EPA6NDL7 271 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 H3BSH0 61 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 H7C2Y5 167 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 SRSF10O75494 262 aaKnown RBP7.87□□□□□ -1.15
TDP1-204ENST00000545686 OR6A2O95222 327 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 TNFP01375 233 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 SPARCP09486 303 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 MAOBP27338 520 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 AKT2P31751 481 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 FNTBP49356 437 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 HOXA1P49639 335 aaPredicted RBP7.87□□□□□ -1.15
TDP1-204ENST00000545686 PPP1CAP62136 330 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 ADAM8P78325 824 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 BTG2P78543 158 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 NAAAQ02083 359 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 MFGE8Q08431 387 aaPredicted RBP7.87□□□□□ -1.15
TDP1-204ENST00000545686 TAF13Q15543 124 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 INPP5JQ15735 1006 aaPredicted RBP7.87□□□□□ -1.15
TDP1-204ENST00000545686 PNLIPRP3Q17RR3 467 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 C10orf91Q5T1B1 145 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 FRMD1Q8N878 549 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 OR52N5Q8NH56 324 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 SLC25A44Q96H78 314 aaPredicted RBP7.87□□□□□ -1.15
TDP1-204ENST00000545686 NARS2Q96I59 477 aaKnown RBP7.87□□□□□ -1.15
TDP1-204ENST00000545686 SLC46A1Q96NT5 459 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 TSNAXQ99598 290 aaKnown RBP7.87□□□□□ -1.15
TDP1-204ENST00000545686 CDC6Q99741 560 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 KXD1Q9BQD3 176 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 NUDT16L1Q9BRJ7 211 aaKnown RBP7.87□□□□□ -1.15
TDP1-204ENST00000545686 MRPL22Q9NWU5 206 aaKnown RBP7.87□□□□□ -1.15
TDP1-204ENST00000545686 SLC39A1Q9NY26 324 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 FBXO4Q9UKT5 387 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 PCDHB10Q9UN67 800 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 R4GMQ9 66 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 TDRD6O60522 2096 aaKnown RBP7.87□□□□□ -1.15
TDP1-204ENST00000545686 MKI67P46013 3256 aaKnown RBP7.86□□□□□ -1.15
TDP1-204ENST00000545686 PCNX3Q9H6A9 2034 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 TRBV6-7A0A0A0MS04 114 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 C9orf170A2RU37 121 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 FRG2CA6NGY1 282 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 F8VVB4 439 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 F8VWA3 439 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 GPANK1O95872 356 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 CTSBP07858 339 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 MAOAP21397 527 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 CXCR1P25024 350 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 DNASE1L1P49184 302 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 ATP1B3P54709 279 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 HFEQ30201 348 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 SCGB2B2Q4G0G5 96 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 PGAP1Q75T13 922 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 SLC35D2Q76EJ3 337 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 LYPD6Q86Y78 171 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 FAM174AQ8TBP5 190 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 TXNIPQ9H3M7 391 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 RAB22AQ9UL26 194 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 GTF2A1LQ9UNN4 478 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 CARHSP1Q9Y2V2 147 aaKnown RBP7.86□□□□□ -1.15
TDP1-204ENST00000545686 LRP12Q9Y561 859 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 HS3ST3A1Q9Y663 406 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 MRPS18BQ9Y676 258 aaKnown RBP7.86□□□□□ -1.15
TDP1-204ENST00000545686 EXPH5Q8NEV8 1989 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 CPED1A4D0V7 1026 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 OR2AT4A6NND4 320 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 F5H0A9 414 aaPredicted RBP7.86□□□□□ -1.15
TDP1-204ENST00000545686 SLC25A12O75746 678 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 TPT1P13693 172 aaKnown RBP7.86□□□□□ -1.15
TDP1-204ENST00000545686 ZNF28P17035 718 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 BDKRB2P30411 391 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 GSK3AP49840 483 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 TAS2R31P59538 309 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 INSM1Q01101 510 aaPredicted RBP7.86□□□□□ -1.15
TDP1-204ENST00000545686 SCRN3Q0VDG4 424 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 SRSF5Q13243 272 aaKnown RBP7.86□□□□□ -1.15
TDP1-204ENST00000545686 PPP1R1AQ13522 171 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 EIF2B1Q14232 305 aaKnown RBP7.86□□□□□ -1.15
TDP1-204ENST00000545686 ACKR1Q16570 336 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 ZNF704Q6ZNC4 412 aaPredicted RBP7.86□□□□□ -1.15
TDP1-204ENST00000545686 RAB11FIP2Q7L804 512 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 OR1S2Q8NGQ3 325 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 OR13C3Q8NGS6 347 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 ARL11Q969Q4 196 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 ZNF285Q96NJ3 590 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 ELF4Q99607 663 aaPredicted RBP7.86□□□□□ -1.15
TDP1-204ENST00000545686 CMKLR1Q99788 373 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 ABHD6Q9BV23 337 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 TMEM100Q9NV29 134 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 CGGBP1Q9UFW8 167 aaPredicted RBP7.86□□□□□ -1.15
TDP1-204ENST00000545686 FARSAQ9Y285 508 aaKnown RBP7.86□□□□□ -1.15
TDP1-204ENST00000545686 RHBDD3Q9Y3P4 386 aa7.86□□□□□ -1.15
TDP1-204ENST00000545686 PHF3Q92576 2039 aaKnown RBP7.86□□□□□ -1.15
TDP1-204ENST00000545686 TRANK1O15050 2925 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 CHD9Q3L8U1 2897 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 ALPK2Q86TB3 2170 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 TEX13DA0A0J9YY54 714 aaPredicted RBP7.85□□□□□ -1.15
TDP1-204ENST00000545686 LOC107986453A0A1B0GWG9 222 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 A0A1W2PQD3 144 aa7.85□□□□□ -1.15
TDP1-204ENST00000545686 TMEM235A6NFC5 223 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms