RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 PIK3IP1Q96FE7 263 aa5.79□□□□□ -1.48
CDCA3-209ENST00000544610 PERPQ96FX8 193 aa5.79□□□□□ -1.48
CDCA3-209ENST00000544610 BOD1Q96IK1 185 aa5.79□□□□□ -1.48
CDCA3-209ENST00000544610 WFIKKN1Q96NZ8 548 aa5.79□□□□□ -1.48
CDCA3-209ENST00000544610 TSPAN32Q96QS1 320 aa5.79□□□□□ -1.48
CDCA3-209ENST00000544610 RBP7Q96R05 134 aa5.79□□□□□ -1.48
CDCA3-209ENST00000544610 TEAD3Q99594 435 aa5.79□□□□□ -1.48
CDCA3-209ENST00000544610 BCL7BQ9BQE9 202 aa5.79□□□□□ -1.48
CDCA3-209ENST00000544610 COPS4Q9BT78 406 aa5.79□□□□□ -1.48
CDCA3-209ENST00000544610 YIPF3Q9GZM5 350 aa5.79□□□□□ -1.48
CDCA3-209ENST00000544610 UBTD1Q9HAC8 227 aa5.79□□□□□ -1.48
CDCA3-209ENST00000544610 ISYNA1Q9NPH2 558 aa5.79□□□□□ -1.48
CDCA3-209ENST00000544610 HINT3Q9NQE9 182 aaKnown RBP5.79□□□□□ -1.48
CDCA3-209ENST00000544610 ZNF346Q9UL40 294 aaKnown RBP5.79□□□□□ -1.48
CDCA3-209ENST00000544610 EXOSC1Q9Y3B2 195 aaKnown RBP5.79□□□□□ -1.48
CDCA3-209ENST00000544610 TMEM14AQ9Y6G1 99 aa5.79□□□□□ -1.48
CDCA3-209ENST00000544610 ABCA4P78363 2273 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 FN1P02751 2386 aaKnown RBP5.78□□□□□ -1.48
CDCA3-209ENST00000544610 TEX13CA0A0J9YWL9 993 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 SLC22A23A1A5C7 686 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 SLC22A20A6NK97 555 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 ZNF726A6NNF4 738 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 INAFM1C9JVW0 142 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 RPL36A-HNRNPH2H7BZ11 118 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 J3QRE1 110 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 ZNF701M0R085 212 aaPredicted RBP5.78□□□□□ -1.48
CDCA3-209ENST00000544610 TNFSF11O14788 317 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 GMFGO60234 142 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 ENTPD6O75354 484 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 SCGB1D2O95969 90 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 CGAP01215 116 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 F13BP05160 661 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 IGFBP1P08833 259 aaPredicted RBP5.78□□□□□ -1.48
CDCA3-209ENST00000544610 PGA4P0DJD7 388 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 PGA3P0DJD8 388 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 CD8BP10966 210 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 IFNGR1P15260 489 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 PAX1P15863 534 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 SPI1P17947 270 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 AHCYP23526 432 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 LOXP28300 417 aaPredicted RBP5.78□□□□□ -1.48
CDCA3-209ENST00000544610 SHC1P29353 583 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 ACVR1BP36896 505 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 CDKN2AP42771 156 aaKnown RBP5.78□□□□□ -1.48
CDCA3-209ENST00000544610 KIR2DL2P43627 348 aaPredicted RBP5.78□□□□□ -1.48
CDCA3-209ENST00000544610 ERVK-25P63136 954 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 POU3F1Q03052 451 aaPredicted RBP5.78□□□□□ -1.48
CDCA3-209ENST00000544610 ACSM1Q08AH1 577 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 ST3GAL4Q11206 333 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 BLMHQ13867 455 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 IRF3Q14653 427 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 KCNMB1Q16558 191 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 MESTQ5EB52 335 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 C10orf128Q5T292 105 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 DEGS2Q6QHC5 323 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 ZNF474Q6S9Z5 364 aaPredicted RBP5.78□□□□□ -1.48
CDCA3-209ENST00000544610 FOXL2NBQ6ZUU3 175 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 ZNF627Q7L945 461 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 SHFQ7M4L6 423 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 SSX8Q7RTT4 187 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 P4HA3Q7Z4N8 544 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 ABHD12BQ7Z5M8 362 aaPredicted RBP5.78□□□□□ -1.48
CDCA3-209ENST00000544610 TMEM123Q8N131 208 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 SYS1Q8N2H4 156 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 IQCF1Q8N6M8 205 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 ACBD7Q8N6N7 88 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 NOXO1Q8NFA2 376 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 BPIFB6Q8NFQ5 453 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 OR52E2Q8NGJ4 325 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 OR52N1Q8NH53 320 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 SPATA3Q8NHX4 192 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 CNIH3Q8TBE1 160 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 ASB17Q8WXJ9 295 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 TMEM80Q96HE8 168 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 GMPPAQ96IJ6 420 aaPredicted RBP5.78□□□□□ -1.48
CDCA3-209ENST00000544610 Q96M85 177 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 MED18Q9BUE0 208 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 WNT10AQ9GZT5 417 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 OPN3Q9H1Y3 402 aaPredicted RBP5.78□□□□□ -1.48
CDCA3-209ENST00000544610 MOV10Q9HCE1 1003 aaKnown RBP5.78□□□□□ -1.48
CDCA3-209ENST00000544610 B3GAT2Q9NPZ5 323 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 ASB6Q9NWX5 421 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 CHCHD3Q9NX63 227 aaKnown RBP5.78□□□□□ -1.48
CDCA3-209ENST00000544610 ELOVL5Q9NYP7 299 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 ERGIC3Q9Y282 383 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 ADAM18Q9Y3Q7 739 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 SNX5Q9Y5X3 404 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 FLVCR1Q9Y5Y0 555 aa5.78□□□□□ -1.48
CDCA3-209ENST00000544610 DOCK7Q96N67 2140 aa5.77□□□□□ -1.49
CDCA3-209ENST00000544610 IGLV1-36A0A0B4J1U3 117 aa5.77□□□□□ -1.49
CDCA3-209ENST00000544610 SMIM31A0A1B0GVY4 71 aa5.77□□□□□ -1.49
CDCA3-209ENST00000544610 OR6C68A6NDL8 312 aa5.77□□□□□ -1.49
CDCA3-209ENST00000544610 CCDC182A6NF36 153 aa5.77□□□□□ -1.49
CDCA3-209ENST00000544610 SHISA8B8ZZ34 492 aa5.77□□□□□ -1.49
CDCA3-209ENST00000544610 C16orf97H3BN30 126 aa5.77□□□□□ -1.49
CDCA3-209ENST00000544610 CXCL13O43927 109 aa5.77□□□□□ -1.49
CDCA3-209ENST00000544610 FAM20BO75063 409 aa5.77□□□□□ -1.49
CDCA3-209ENST00000544610 TMCC2O75069 709 aa5.77□□□□□ -1.49
CDCA3-209ENST00000544610 SS18L1O75177 396 aaPredicted RBP5.77□□□□□ -1.49
CDCA3-209ENST00000544610 SLC43A1O75387 559 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms