RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 DECR2Q9NUI1 292 aa11.13□□□□□ -0.63
SEMA4D-223ENST00000540475 HIF1ANQ9NWT6 349 aa11.13□□□□□ -0.63
SEMA4D-223ENST00000540475 SAMD4AQ9UPU9 718 aaKnown RBP11.13□□□□□ -0.63
SEMA4D-223ENST00000540475 ARHGAP32A7KAX9 2087 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 A0A0A6YYJ9 748 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 A0A1W2PPL8 197 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 OR6C6A6NF89 314 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 ZSCAN5BA6NJL1 495 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 CLDN25C9JDP6 229 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 H7C1C5 153 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 XKRYO14609 159 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 TCF21O43680 179 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 SNX3O60493 162 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 HSD17B1P14061 328 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 RPL4P36578 427 aaKnown RBP11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 ARHGDIAP52565 204 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 LCN6P62502 163 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 HIST1H3AP68431 136 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 PSG7Q13046 419 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 SEC23BQ15437 767 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 TSTQ16762 297 aaKnown RBP11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 HFEQ30201 348 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 SPATA46Q5T0L3 261 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 HIST2H3PS2Q5TEC6 136 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 LIPNQ5VXI9 398 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 ACSM5Q6NUN0 579 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 DPY19L2P2Q6ZN68 376 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 HIST2H3AQ71DI3 136 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 VASH1Q7L8A9 365 aaPredicted RBP11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 ADCK1Q86TW2 530 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 NPEPL1Q8NDH3 523 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 ABHD4Q8TB40 342 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 LRRC37BQ96QE4 947 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 GPA33Q99795 319 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 NDEL1Q9GZM8 345 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 ZNF665Q9H7R5 613 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 CD300AQ9UGN4 299 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 EGFL7Q9UHF1 273 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 ATPIF1Q9UII2 106 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 GRIP1Q9Y3R0 1128 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 FAM32AQ9Y421 112 aaKnown RBP11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 WIPI2Q9Y4P8 454 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 CACNG2Q9Y698 323 aa11.12□□□□□ -0.63
SEMA4D-223ENST00000540475 TRBV4-1A0A0J9YWV2 114 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 PLSCR5A0PG75 271 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 J3QW42 95 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 IMPA2O14732 288 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 SGCEO43556 437 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 SPRY3O43610 288 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 KHDRBS3O75525 346 aaKnown RBP11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 IGHV2-5P01817 119 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 KITLGP21583 273 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 SRP14P37108 136 aaKnown RBP11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 GLO1Q04760 184 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 AQP6Q13520 282 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 KRR1Q13601 381 aaKnown RBP11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 ZMAT1Q5H9K5 638 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 MTX3Q5HYI7 312 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 C1orf229Q6ZS94 237 aaPredicted RBP11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 PTCHD4Q6ZW05 846 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 ZER1Q7Z7L7 766 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 GLB1L2Q8IW92 636 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 FAM86B1Q8N7N1 296 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 ICA1LQ8NDH6 482 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 RAB1CQ92928 201 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 RASD2Q96D21 266 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 RAB39BQ96DA2 213 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 PYURFQ96I23 114 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 EGLN1Q9GZT9 426 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 NARFLQ9H6Q4 476 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 EMC7Q9NPA0 242 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 METRNQ9UJH8 293 aa11.11□□□□□ -0.63
SEMA4D-223ENST00000540475 TENM1Q9UKZ4 2725 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 ARPC3O15145 178 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 PLPP2O43688 288 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 PNPP00491 289 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 ITGA2P17301 1181 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 CDKN2AP42771 156 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 SRSF2Q01130 221 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 MVKQ03426 396 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 SLC3A1Q07837 685 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 RFX4Q33E94 735 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 CCDC92Q53HC0 331 aaPredicted RBP11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 SPRNQ5BIV9 151 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 SMARCD3Q6STE5 483 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 TEX29Q8N6K0 151 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 ZFAND2BQ8WV99 257 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 PTP4A1Q93096 173 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 HAVCR1Q96D42 359 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 TIMD4Q96H15 378 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 RSRC1Q96IZ7 334 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 COG8Q96MW5 612 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 DCLRE1CQ96SD1 692 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 NUAK2Q9H093 628 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 SYT4Q9H2B2 425 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 POFUT1Q9H488 388 aa11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 COA3Q9Y2R0 106 aaPredicted RBP11.1□□□□□ -0.63
SEMA4D-223ENST00000540475 DOCK11Q5JSL3 2073 aa11.09□□□□□ -0.63
SEMA4D-223ENST00000540475 PPIAL4EA0A075B759 164 aa11.09□□□□□ -0.63
SEMA4D-223ENST00000540475 PPIAL4CA0A0B4J2A2 164 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms