RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 EIF3GO75821 320 aaKnown RBP eCLIP-0.19□□□□□ -2.44
COPB1-212ENST00000534771 ATP5LO75964 103 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 MBD3O95983 291 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 NAPSAO96009 420 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 IGHV2-5P01817 119 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 IGHG2P01859 326 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 FGF1P05230 155 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 CTSLP07711 333 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 CD3GP09693 182 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 CD28P10747 220 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 RAB3AP20336 220 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 AHCYP23526 432 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 MMP11P24347 488 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 HMGB2P26583 209 aaKnown RBP-0.19□□□□□ -2.44
COPB1-212ENST00000534771 GNA11P29992 359 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 MAGEA3P43357 314 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 ERFP50548 548 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 FOXA1P55317 472 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 IRX3P78415 501 aaPredicted RBP-0.19□□□□□ -2.44
COPB1-212ENST00000534771 NUCB2P80303 420 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 ST3GAL4Q11206 333 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 BTN1A1Q13410 526 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 CLINT1Q14677 625 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 KLHL38Q2WGJ6 581 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 KRTAP25-1Q3LHN0 102 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 GGTA1PQ4G0N0 100 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 KCTD21Q4G0X4 260 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 CCDC92Q53HC0 331 aaPredicted RBP-0.19□□□□□ -2.44
COPB1-212ENST00000534771 SFT2D3Q587I9 215 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 PDZD11Q5EBL8 140 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 DMRTC1Q5HYR2 192 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 SOHLH1Q5JUK2 328 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 C1orf220Q5T0J3 134 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 SPECC1LQ69YQ0 1117 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 KCNIP4Q6PIL6 250 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 ECHDC2Q86YB7 292 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 EGFL6Q8IUX8 553 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 PUSL1Q8N0Z8 303 aaKnown RBP-0.19□□□□□ -2.44
COPB1-212ENST00000534771 B3GNT7Q8NFL0 401 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 STEAP2Q8NFT2 490 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 OR56B1Q8NGI3 324 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 OR2G2Q8NGZ5 317 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 PTP4A1Q93096 173 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 UBE2E3Q969T4 207 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 TMEM186Q96B77 213 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 OTUB2Q96DC9 234 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 CXorf40BQ96DE9 158 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 PIK3IP1Q96FE7 263 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 CNDP1Q96KN2 507 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 JAKMIP1Q96N16 626 aaKnown RBP-0.19□□□□□ -2.44
COPB1-212ENST00000534771 MS4A4EQ96PG1 132 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 CLCC1Q96S66 551 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 SORT1Q99523 831 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 RIT2Q99578 217 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 HIGD2AQ9BW72 106 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 FAIM2Q9BWQ8 316 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 MRPL32Q9BYC8 188 aaKnown RBP-0.19□□□□□ -2.44
COPB1-212ENST00000534771 ZNF286AQ9HBT8 521 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 MTRRQ9UBK8 725 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 TRMT112Q9UI30 125 aaKnown RBP-0.19□□□□□ -2.44
COPB1-212ENST00000534771 CHMP2BQ9UQN3 213 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 CSDC2Q9Y534 153 aaKnown RBP-0.19□□□□□ -2.44
COPB1-212ENST00000534771 COL4A2P08572 1712 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 ADGRB3O60242 1522 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 PALLDQ8WX93 1383 aa-0.19□□□□□ -2.44
COPB1-212ENST00000534771 IGKV1D-37A0A075B6S9 117 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 A0A0U1RQV5 110 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 SLC9B1P1A6NJY1 282 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 GGTLC3B5MD39 225 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 KRBOX1C9JBD0 128 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 G3V3Q6 166 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 CLDN34H7C241 214 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 NVLO15381 856 aaKnown RBP-0.2□□□□□ -2.44
COPB1-212ENST00000534771 VPS26AO75436 327 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 SURF6O75683 361 aaKnown RBP-0.2□□□□□ -2.44
COPB1-212ENST00000534771 SEMA3DO95025 777 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 AIFM1O95831 613 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 RPN2P04844 631 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 GZMAP12544 262 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 NT5EP21589 574 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 HSD17B2P37059 387 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 FDFT1P37268 417 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 CEACAM3P40198 252 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 TNNT3P45378 269 aaPredicted RBP-0.2□□□□□ -2.44
COPB1-212ENST00000534771 QARSP47897 775 aaKnown RBP-0.2□□□□□ -2.44
COPB1-212ENST00000534771 HCAR3P49019 387 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 P2RX1P51575 399 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 HSF2Q03933 536 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 RPA4Q13156 261 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 CUL2Q13617 745 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 DPYSL2Q16555 572 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 LUZP6Q538Z0 58 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 ETFRF1Q6IPR1 90 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 RAB12Q6IQ22 244 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 ENPP6Q6UWR7 440 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 ERO1BQ86YB8 467 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 NUDCD3Q8IVD9 361 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 LIX1Q8N485 282 aa-0.2□□□□□ -2.44
COPB1-212ENST00000534771 EIF4E3Q8N5X7 224 aaKnown RBP-0.2□□□□□ -2.44
COPB1-212ENST00000534771 ZNF713Q8N859 430 aaPredicted RBP-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms