RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 ATP1B1P05026 303 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 PIPP12273 146 aaPredicted RBP11.15□□□□□ -0.62
BDNF-218ENST00000533246 GDF1P27539 372 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 LAP3P28838 519 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 RBMS1P29558 406 aaKnown RBP11.15□□□□□ -0.62
BDNF-218ENST00000533246 CAV2P51636 162 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 SPCS3P61009 180 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 DCDP81605 110 aaKnown RBP11.15□□□□□ -0.62
BDNF-218ENST00000533246 RPL18Q07020 188 aaKnown RBP11.15□□□□□ -0.62
BDNF-218ENST00000533246 MN1Q10571 1320 aaPredicted RBP11.15□□□□□ -0.62
BDNF-218ENST00000533246 HYAL1Q12794 435 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 SSX1Q16384 188 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 FAM74A1Q5RGS3 127 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 SBF2Q86WG5 1849 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 OR14K1Q8NGZ2 314 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 SLC2A12Q8TD20 617 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 PHB2Q99623 299 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 CDC6Q99741 560 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 ARHGAP9Q9BRR9 750 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 PPP1R14DQ9NXH3 145 aa11.15□□□□□ -0.62
BDNF-218ENST00000533246 ZNF230Q9UIE0 474 aaPredicted RBP11.15□□□□□ -0.62
BDNF-218ENST00000533246 MDC1Q14676 2089 aaKnown RBP11.15□□□□□ -0.63
BDNF-218ENST00000533246 LY75O60449 1722 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 TMEM200CA6NKL6 621 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 CDC42EP2O14613 210 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 ICOSLGO75144 302 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 CSF1P09603 554 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 RAB40ALP0C0E4 278 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 CALCBP10092 127 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 HTR2CP28335 458 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 EIF2S3P41091 472 aaKnown RBP11.14□□□□□ -0.63
BDNF-218ENST00000533246 FOLR3P41439 243 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 KIR2DL3P43628 341 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 TNK1Q13470 666 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 TPBGQ13641 420 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 PRTGQ2VWP7 1150 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 CBLN2Q8IUK8 224 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 ZNF321PQ8N8H1 164 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 OR14A16Q8NHC5 309 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 RAB40AQ8WXH6 277 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 C1orf198Q9H425 327 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 RGCCQ9H4X1 137 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 ZNF346Q9UL40 294 aaKnown RBP11.14□□□□□ -0.63
BDNF-218ENST00000533246 GAAP10253 952 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 PTGFRP43088 359 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 EVX1P49640 407 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 POLR2HP52434 150 aaKnown RBP11.14□□□□□ -0.63
BDNF-218ENST00000533246 C17orf67Q0P5P2 114 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 THSD4Q6ZMP0 1018 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 ZNF705AQ6ZN79 300 aaPredicted RBP11.14□□□□□ -0.63
BDNF-218ENST00000533246 CAMKMTQ7Z624 323 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 UBAC2Q8NBM4 344 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 RELL2Q8NC24 303 aaPredicted RBP11.14□□□□□ -0.63
BDNF-218ENST00000533246 AGBL5Q8NDL9 886 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 APH1BQ8WW43 257 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 FAM3DQ96BQ1 224 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 EIF5A2Q9GZV4 153 aaKnown RBP11.14□□□□□ -0.63
BDNF-218ENST00000533246 BANF2Q9H503 90 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 SIRT3Q9NTG7 399 aaPredicted RBP11.14□□□□□ -0.63
BDNF-218ENST00000533246 B4GALT7Q9UBV7 327 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 NPFFR2Q9Y5X5 522 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 BRWD3Q6RI45 1802 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 IGHV3-64DA0A0J9YX35 117 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 A0A1W2PPC4 97 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 C2CD4DB7Z1M9 353 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 SLC43A1O75387 559 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 OR7C1O76099 320 aaPredicted RBP11.14□□□□□ -0.63
BDNF-218ENST00000533246 DPP4P27487 766 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 DCAF7P61962 342 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 NKX6-1P78426 367 aaPredicted RBP11.14□□□□□ -0.63
BDNF-218ENST00000533246 RBMS3Q6XE24 437 aaKnown RBP11.14□□□□□ -0.63
BDNF-218ENST00000533246 LINC00696Q6ZRV3 163 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 POC1BQ8TC44 478 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 IL1F10Q8WWZ1 152 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 OR2M2Q96R28 347 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 DDOQ99489 341 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 EMC7Q9NPA0 242 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 WBP1LQ9NX94 342 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 TINAGQ9UJW2 476 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 QSER1Q2KHR3 1735 aa11.14□□□□□ -0.63
BDNF-218ENST00000533246 A8MVM7 634 aa11.13□□□□□ -0.63
BDNF-218ENST00000533246 FBXO24O75426 580 aa11.13□□□□□ -0.63
BDNF-218ENST00000533246 CRYBA1P05813 215 aa11.13□□□□□ -0.63
BDNF-218ENST00000533246 LIMS3P0CW19 117 aa11.13□□□□□ -0.63
BDNF-218ENST00000533246 LIMS4P0CW20 117 aa11.13□□□□□ -0.63
BDNF-218ENST00000533246 SELLP14151 372 aa11.13□□□□□ -0.63
BDNF-218ENST00000533246 NDUFB7P17568 137 aa11.13□□□□□ -0.63
BDNF-218ENST00000533246 RBMS2Q15434 407 aaKnown RBP11.13□□□□□ -0.63
BDNF-218ENST00000533246 ZXDCQ2QGD7 858 aaPredicted RBP11.13□□□□□ -0.63
BDNF-218ENST00000533246 TRIM61Q5EBN2 209 aa11.13□□□□□ -0.63
BDNF-218ENST00000533246 ZNF585AQ6P3V2 769 aa11.13□□□□□ -0.63
BDNF-218ENST00000533246 LSRQ86X29 649 aaPredicted RBP11.13□□□□□ -0.63
BDNF-218ENST00000533246 PXT1Q8NFP0 134 aa11.13□□□□□ -0.63
BDNF-218ENST00000533246 EDAQ92838 391 aa11.13□□□□□ -0.63
BDNF-218ENST00000533246 NECAB3Q96P71 396 aaPredicted RBP11.13□□□□□ -0.63
BDNF-218ENST00000533246 KCNG2Q9UJ96 466 aa11.13□□□□□ -0.63
BDNF-218ENST00000533246 A0A1B0GTH9 108 aa11.13□□□□□ -0.63
BDNF-218ENST00000533246 NAP1L6A6NFF2 107 aa11.13□□□□□ -0.63
BDNF-218ENST00000533246 TMEM212A6NML5 194 aa11.13□□□□□ -0.63
BDNF-218ENST00000533246 SHISA8B8ZZ34 492 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms