RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 C19orf24Q9BVV8 132 aa17.6■□□□□ 0.41
SDCBP-209ENST00000522243 SYT4Q9H2B2 425 aa17.6■□□□□ 0.41
SDCBP-209ENST00000522243 POFUT1Q9H488 388 aa17.6■□□□□ 0.41
SDCBP-209ENST00000522243 MSL2Q9HCI7 577 aa17.6■□□□□ 0.41
SDCBP-209ENST00000522243 NRIP3Q9NQ35 241 aa17.6■□□□□ 0.41
SDCBP-209ENST00000522243 NDRG4Q9ULP0 352 aaKnown RBP17.6■□□□□ 0.41
SDCBP-209ENST00000522243 COA3Q9Y2R0 106 aaPredicted RBP17.6■□□□□ 0.41
SDCBP-209ENST00000522243 WIPI2Q9Y4P8 454 aa17.6■□□□□ 0.41
SDCBP-209ENST00000522243 IER3IP1Q9Y5U9 82 aa17.6■□□□□ 0.41
SDCBP-209ENST00000522243 SLC16A7O60669 478 aa17.59■□□□□ 0.41
SDCBP-209ENST00000522243 ABHD16AO95870 558 aa17.59■□□□□ 0.41
SDCBP-209ENST00000522243 PCMT1P22061 227 aa17.59■□□□□ 0.41
SDCBP-209ENST00000522243 SDHAP31040 664 aa17.59■□□□□ 0.41
SDCBP-209ENST00000522243 MSX2P35548 267 aaPredicted RBP17.59■□□□□ 0.41
SDCBP-209ENST00000522243 HTR5AP47898 357 aa17.59■□□□□ 0.41
SDCBP-209ENST00000522243 FXYD6P3P58550 94 aa17.59■□□□□ 0.41
SDCBP-209ENST00000522243 SCRN3Q0VDG4 424 aa17.59■□□□□ 0.41
SDCBP-209ENST00000522243 HNRNPA0Q13151 305 aaKnown RBP17.59■□□□□ 0.41
SDCBP-209ENST00000522243 KRT72Q14CN4 511 aa17.59■□□□□ 0.41
SDCBP-209ENST00000522243 HFEQ30201 348 aa17.59■□□□□ 0.41
SDCBP-209ENST00000522243 SPRNQ5BIV9 151 aa17.59■□□□□ 0.41
SDCBP-209ENST00000522243 CPLX4Q7Z7G2 160 aa17.59■□□□□ 0.41
SDCBP-209ENST00000522243 OR51F2Q8NH61 342 aa17.59■□□□□ 0.41
SDCBP-209ENST00000522243 CCL17Q92583 94 aa17.59■□□□□ 0.41
SDCBP-209ENST00000522243 ELMOD3Q96FG2 381 aa17.59■□□□□ 0.41
SDCBP-209ENST00000522243 GPA33Q99795 319 aa17.59■□□□□ 0.41
SDCBP-209ENST00000522243 NSRP1Q9H0G5 558 aaKnown RBP17.59■□□□□ 0.41
SDCBP-209ENST00000522243 UNC119BA6NIH7 251 aa17.58■□□□□ 0.4
SDCBP-209ENST00000522243 CLDN25C9JDP6 229 aa17.58■□□□□ 0.4
SDCBP-209ENST00000522243 ATP8B1O43520 1251 aa17.58■□□□□ 0.4
SDCBP-209ENST00000522243 SGCEO43556 437 aa17.58■□□□□ 0.4
SDCBP-209ENST00000522243 AHCYL1O43865 530 aa17.58■□□□□ 0.4
SDCBP-209ENST00000522243 KHDRBS3O75525 346 aaKnown RBP17.58■□□□□ 0.4
SDCBP-209ENST00000522243 FAM209AQ5JX71 171 aa17.58■□□□□ 0.4
SDCBP-209ENST00000522243 GPR139Q6DWJ6 353 aa17.58■□□□□ 0.4
SDCBP-209ENST00000522243 PTCHD4Q6ZW05 846 aa17.58■□□□□ 0.4
SDCBP-209ENST00000522243 ZNF771Q7L3S4 317 aaPredicted RBP17.58■□□□□ 0.4
SDCBP-209ENST00000522243 C1orf174Q8IYL3 243 aa17.58■□□□□ 0.4
SDCBP-209ENST00000522243 SLC7A6Q92536 515 aa17.58■□□□□ 0.4
SDCBP-209ENST00000522243 GPX7Q96SL4 187 aaPredicted RBP17.58■□□□□ 0.4
SDCBP-209ENST00000522243 ZNF665Q9H7R5 613 aa17.58■□□□□ 0.4
SDCBP-209ENST00000522243 PLEK2Q9NYT0 353 aa17.58■□□□□ 0.4
SDCBP-209ENST00000522243 GRIP1Q9Y3R0 1128 aa17.58■□□□□ 0.4
SDCBP-209ENST00000522243 TIMM8AO60220 97 aaPredicted RBP17.57■□□□□ 0.4
SDCBP-209ENST00000522243 ICMTO60725 284 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 GPANK1O95872 356 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 COX5BP10606 129 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 RBMXP38159 391 aaKnown RBP17.57■□□□□ 0.4
SDCBP-209ENST00000522243 CDKN2AP42771 156 aaKnown RBP17.57■□□□□ 0.4
SDCBP-209ENST00000522243 CENPAP49450 140 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 GYS2P54840 703 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 SPIBQ01892 262 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 PSG7Q13046 419 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 LIPNQ5VXI9 398 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 C1orf94Q6P1W5 598 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 ARL9Q6T311 187 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 VASH1Q7L8A9 365 aaPredicted RBP17.57■□□□□ 0.4
SDCBP-209ENST00000522243 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.57■□□□□ 0.4
SDCBP-209ENST00000522243 PYURFQ96I23 114 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 WACQ9BTA9 647 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 NUAK2Q9H093 628 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 METTL17Q9H7H0 456 aaPredicted RBP17.57■□□□□ 0.4
SDCBP-209ENST00000522243 GORASP2Q9H8Y8 452 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 KRCC1Q9NPI7 259 aaPredicted RBP17.57■□□□□ 0.4
SDCBP-209ENST00000522243 CYSLTR2Q9NS75 346 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 VSX1Q9NZR4 365 aaPredicted RBP17.57■□□□□ 0.4
SDCBP-209ENST00000522243 METRNQ9UJH8 293 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 KLHL21Q9UJP4 597 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 TANC2Q9HCD6 1990 aa17.57■□□□□ 0.4
SDCBP-209ENST00000522243 PPP1R3DO95685 299 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 LIPAP38571 399 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 RPS6KA3P51812 740 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 DBPQ10586 325 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-209ENST00000522243 AQP6Q13520 282 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 MTX3Q5HYI7 312 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 FAHD2BQ6P2I3 314 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-209ENST00000522243 DPY19L2P2Q6ZN68 376 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 ZER1Q7Z7L7 766 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 GLB1L2Q8IW92 636 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 RFLNBQ8N5W9 214 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 RAB1CQ92928 201 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 FAHD2AQ96GK7 314 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 TIMD4Q96H15 378 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 DHRS1Q96LJ7 313 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 TSSK2Q96PF2 358 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 ERMAPQ96PL5 475 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-209ENST00000522243 FUZQ9BT04 418 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 EGLN1Q9GZT9 426 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 TBCCD1Q9NVR7 557 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 ASH2LQ9UBL3 628 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 STARD10Q9Y365 291 aa17.56■□□□□ 0.4
SDCBP-209ENST00000522243 H3BSA7 217 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 TCF21O43680 179 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 DEAF1O75398 565 aaPredicted RBP17.55■□□□□ 0.4
SDCBP-209ENST00000522243 UBOX5O94941 541 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 GADD45GO95257 159 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 SEMG1P04279 462 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 ITGA2P17301 1181 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 GSTM3P21266 225 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 TNFAIP6P98066 277 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms