RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 FAM151AQ8WW52 585 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 NDRG1Q92597 394 aaKnown RBP2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 MED8Q96G25 268 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 PKNOX2Q96KN3 472 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 KCTD14Q9BQ13 255 aaPredicted RBP2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 SLC25A22Q9H936 323 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 RPRD1BQ9NQG5 326 aaKnown RBP2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 C20orf96Q9NUD7 363 aaPredicted RBP2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 AHSPQ9NZD4 102 aa2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 STOX2Q9P2F5 926 aaPredicted RBP2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 MTRF1LQ9UGC7 380 aaKnown RBP2.34□□□□□ -2.03
HMGN1P28-201ENST00000521340 MYH4Q9Y623 1939 aa2.34□□□□□ -2.04
HMGN1P28-201ENST00000521340 COL5A3P25940 1745 aaPredicted RBP2.34□□□□□ -2.04
HMGN1P28-201ENST00000521340 DOT1LQ8TEK3 1739 aa2.34□□□□□ -2.04
HMGN1P28-201ENST00000521340 FOCADQ5VW36 1801 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 BAZ2AQ9UIF9 1905 aaKnown RBP2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 KBTBD11-OT1A0A1B0GTJ5 212 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 SMCO3A2RU48 225 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 GABRR3A8MPY1 467 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 GOLGA8TH3BQL2 631 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 HDAC3O15379 428 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 SOX15O60248 233 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 CLDN11O75508 207 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 BBOX1O75936 387 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 AQP8O94778 261 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 CLIC3O95833 236 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 IGLV2-23P01705 113 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 ALDOBP05062 364 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 SERPINA5P05154 406 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 HPNP05981 417 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZNF250P15622 560 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 SRMP19623 302 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 KLK2P20151 261 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 BCKDHBP21953 392 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 HTR1EP28566 365 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 FMO3P31513 532 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 FOXN2P32314 431 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 RBMXP38159 391 aaKnown RBP2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 RORCP51449 518 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 SUB1P53999 127 aaKnown RBP eCLIP2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 CLDN18P56856 261 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 EIF3EP60228 445 aaKnown RBP2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 PRPS1P60891 318 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 RPS21P63220 83 aaKnown RBP2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 AQP6Q13520 282 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 CYTH1Q15438 398 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 SLC1A5Q15758 541 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZNF726P1Q15940 193 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 SGCAQ16586 387 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 GUCA2BQ16661 112 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 PGGHGQ32M88 737 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 HIKESHIQ53FT3 197 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 AGBL2Q5U5Z8 902 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 ANKRD26P1Q6NSI1 321 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 CNIH2Q6PI25 160 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 SSX9Q7RTT3 188 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 HDDC2Q7Z4H3 204 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 P2RY8Q86VZ1 359 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZNF100Q8IYN0 542 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 LYG1Q8N1E2 194 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 STPG2Q8N412 459 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 OR4F15Q8NGB8 312 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 OR10R2Q8NGX6 335 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 ISG20Q96AZ6 181 aaKnown RBP2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 SGK3Q96BR1 496 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 CCDC126Q96EE4 140 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 TSNARE1Q96NA8 513 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 POLR2J2Q9GZM3 115 aaKnown RBP2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 POLR2J3Q9H1A7 115 aaKnown RBP2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 NTN4Q9HB63 628 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 PRSS16Q9NQE7 514 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 MMP26Q9NRE1 261 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 LYARQ9NX58 379 aaKnown RBP2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 CLN8Q9UBY8 286 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 ING4Q9UNL4 249 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 RHBDD3Q9Y3P4 386 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 MAP3K19Q56UN5 1328 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 TTC21AQ8NDW8 1320 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 MAP3K5Q99683 1374 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 ATAD5Q96QE3 1844 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 NAV1Q8NEY1 1877 aa2.33□□□□□ -2.04
HMGN1P28-201ENST00000521340 LRP6O75581 1613 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 IGLV3-10A0A075B6K4 115 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 TRAV39A0A0B4J263 110 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 SCAMP2O15127 329 aaKnown RBP2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZNF861PO60384 105 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 HUS1O60921 280 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 EEDO75530 441 aaKnown RBP2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 TNFSF13O75888 250 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 LY6G6DO95868 133 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 CRYGCP07315 174 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 MYL2P10916 166 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 RCC1P18754 421 aaPredicted RBP2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 ELK1P19419 428 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 CPN2P22792 545 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZBTB25P24278 435 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 CCNE1P24864 410 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 SLC1A1P43005 524 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 CX3CR1P49238 355 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 UGT2B15P54855 530 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms