RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 CCDC197Q8NCU1 140 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 THAP6Q8TBB0 222 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 CKAP2Q8WWK9 683 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 IFT81Q8WYA0 676 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 TANKQ92844 425 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 POP5Q969H6 163 aaKnown RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 EME1Q96AY2 570 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 ORAI1Q96D31 301 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 CHMP6Q96FZ7 201 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 NSMCE2Q96MF7 247 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 VSTM2LQ96N03 204 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 LMF2Q9BU23 707 aaKnown RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 FNDC11Q9BVV2 318 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 KIFC1Q9BW19 673 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 ROPN1BQ9BZX4 212 aaPredicted RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 MMP28Q9H239 520 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 TPK1Q9H3S4 243 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 MARCH7Q9H992 704 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 ROPN1Q9HAT0 212 aaPredicted RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 CDH20Q9HBT6 801 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 PPANQ9NQ55 473 aaKnown RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 SLC17A5Q9NRA2 495 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 SERINC1Q9NRX5 453 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 KLRF1Q9NZS2 232 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 UVRAGQ9P2Y5 699 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 MALT1Q9UDY8 824 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 UBQLN2Q9UHD9 624 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 RNF150Q9ULK6 438 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 FOXA2Q9Y261 457 aaPredicted RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 PLLPQ9Y342 182 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 UTP11Q9Y3A2 253 aaKnown RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 CACNG2Q9Y698 323 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 U3KQV3 271 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 DNAH5Q8TE73 4624 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 IGKV3D-15A0A087WSY6 115 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 A0A1W2PPW3 197 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 H3BMM5 538 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 H7C0C1 242 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 hCG_2039718K7EN88 272 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 PLPP1O14494 284 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 ACOX3O15254 700 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 TAPBPO15533 448 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 RAD51CO43502 376 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 CYTIPO60759 359 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 ATP5HO75947 161 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 VAPBO95292 243 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 IGKV1D-16P01601 117 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 IGHV3-9P01782 118 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 IGHV2-70P01814 119 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 KRT6BP04259 564 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 MELTFP08582 738 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 ADRA2AP08913 450 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 H2AFZP0C0S5 128 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 CPMP14384 443 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 CPN2P22792 545 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 BDKRB2P30411 391 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 EVI2BP34910 448 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 MAGEA4P43358 317 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 ATP5OP48047 213 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 NPBWR1P48145 328 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 KRT6CP48668 564 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 MAPK12P53778 367 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 HADHBP55084 474 aaKnown RBP3.13□□□□□ -1.91
VPS13B-208ENST00000521037 MTCP1P56278 107 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 TMEM33P57088 247 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 SEC61A1P61619 476 aaKnown RBP3.13□□□□□ -1.91
VPS13B-208ENST00000521037 MRPS11P82912 194 aaKnown RBP3.13□□□□□ -1.91
VPS13B-208ENST00000521037 CAV1Q03135 178 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 PLCXD2Q0VAA5 305 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 RASGEF1BQ0VAM2 473 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 ZNF154Q13106 437 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 TWIST1Q15672 202 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 NPTX1Q15818 432 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 PLPPR5Q32ZL2 321 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 DMRTC1Q5HYR2 192 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 CCNYL2Q5T2Q4 361 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 GCNT6Q5T4J0 391 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 AVPI1Q5T686 147 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 FBXW9Q5XUX1 488 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 ZNF470Q6ECI4 717 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 SLC25A24Q6NUK1 477 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 H2AFVQ71UI9 128 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 BZW1Q7L1Q6 419 aaKnown RBP3.13□□□□□ -1.91
VPS13B-208ENST00000521037 CHMP1BQ7LBR1 199 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 SSX8Q7RTT4 187 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 PEX26Q7Z412 305 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 FOXRED2Q8IWF2 684 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 AQP12AQ8IXF9 295 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 KATNAL2Q8IYT4 538 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 ZCCHC7Q8N3Z6 543 aaKnown RBP3.13□□□□□ -1.91
VPS13B-208ENST00000521037 TEX29Q8N6K0 151 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 SLC24A4Q8NFF2 622 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 NUP37Q8NFH4 326 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 OR7G1Q8NGA0 311 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 OR52E4Q8NGH9 312 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 MAIP1Q8WWC4 291 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 UPRTQ96BW1 309 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms