RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 C4orf45Q96LM5 186 aa10.6□□□□□ -0.71
LMNA-224ENST00000515711 FOXN4Q96NZ1 517 aa10.6□□□□□ -0.71
LMNA-224ENST00000515711 DCLRE1CQ96SD1 692 aaKnown RBP10.6□□□□□ -0.71
LMNA-224ENST00000515711 KCNS3Q9BQ31 491 aa10.6□□□□□ -0.71
LMNA-224ENST00000515711 SLITRK2Q9H156 845 aa10.6□□□□□ -0.71
LMNA-224ENST00000515711 NELFAQ9H3P2 528 aa10.6□□□□□ -0.71
LMNA-224ENST00000515711 TPK1Q9H3S4 243 aa10.6□□□□□ -0.71
LMNA-224ENST00000515711 NIPAL2Q9H841 368 aa10.6□□□□□ -0.71
LMNA-224ENST00000515711 MOB1AQ9H8S9 216 aa10.6□□□□□ -0.71
LMNA-224ENST00000515711 POLE4Q9NR33 117 aa10.6□□□□□ -0.71
LMNA-224ENST00000515711 EMC3Q9P0I2 261 aa10.6□□□□□ -0.71
LMNA-224ENST00000515711 PLEKHB1Q9UF11 243 aaPredicted RBP10.6□□□□□ -0.71
LMNA-224ENST00000515711 CYB5R1Q9UHQ9 305 aa10.6□□□□□ -0.71
LMNA-224ENST00000515711 LRP12Q9Y561 859 aa10.6□□□□□ -0.71
LMNA-224ENST00000515711 FLVCR1Q9Y5Y0 555 aa10.6□□□□□ -0.71
LMNA-224ENST00000515711 R4GMQ9 66 aa10.6□□□□□ -0.71
LMNA-224ENST00000515711 COL12A1Q99715 3063 aa10.6□□□□□ -0.71
LMNA-224ENST00000515711 PTPN13Q12923 2485 aa10.6□□□□□ -0.71
LMNA-224ENST00000515711 TEP1Q99973 2627 aaKnown RBP10.59□□□□□ -0.71
LMNA-224ENST00000515711 IGKV3D-15A0A087WSY6 115 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 TRBV5-5A0A0J9YX44 114 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 OR6C65A6NJZ3 312 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 OR4C45A6NMZ5 311 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 ZNF878C9JN71 531 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 RGS5O15539 181 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 DHHO43323 396 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 MPZL1O95297 269 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 H2BFMP0C1H6 154 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 CLEC2LP0C7M8 214 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 WT1P19544 449 aaPredicted RBP10.59□□□□□ -0.71
LMNA-224ENST00000515711 KLK2P20151 261 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 RAB3BP20337 219 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 MSR1P21757 451 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 RPS27P42677 84 aaKnown RBP10.59□□□□□ -0.71
LMNA-224ENST00000515711 PPP5CP53041 499 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 CLDN15P56746 228 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 CLDN18P56856 261 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 NANOS3P60323 173 aaKnown RBP10.59□□□□□ -0.71
LMNA-224ENST00000515711 RPS11P62280 158 aaKnown RBP eCLIP10.59□□□□□ -0.71
LMNA-224ENST00000515711 STK11Q15831 433 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 DEFB109BQ30KR1 87 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 Q499Y3 187 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 HSD17B12Q53GQ0 312 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 RIPPLY2Q5TAB7 128 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 OR7E24Q6IFN5 339 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 KLHL24Q6TFL4 600 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 LRRC69Q6ZNQ3 347 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.59□□□□□ -0.71
LMNA-224ENST00000515711 CCDC190Q86UF4 302 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.59□□□□□ -0.71
LMNA-224ENST00000515711 ZNF676Q8N7Q3 588 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 RNF166Q96A37 237 aaPredicted RBP10.59□□□□□ -0.71
LMNA-224ENST00000515711 MAP6Q96JE9 813 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 ZNF385AQ96PM9 386 aaKnown RBP10.59□□□□□ -0.71
LMNA-224ENST00000515711 AMELYQ99218 206 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 SMAD5Q99717 465 aaKnown RBP10.59□□□□□ -0.71
LMNA-224ENST00000515711 PDCD1LG2Q9BQ51 273 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 SLC30A2Q9BRI3 323 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 ULBP2Q9BZM5 246 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 SLC6A15Q9H2J7 730 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 ZDHHC11Q9H8X9 412 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 SEC61A2Q9H9S3 476 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 RNF122Q9H9V4 155 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 FRRS1LQ9P0K9 344 aa10.59□□□□□ -0.71
LMNA-224ENST00000515711 FOXD3Q9UJU5 478 aaPredicted RBP10.59□□□□□ -0.71
LMNA-224ENST00000515711 PHF3Q92576 2039 aaKnown RBP10.58□□□□□ -0.72
LMNA-224ENST00000515711 SLC19A2O60779 497 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 NPR2P20594 1047 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 RFC3P40938 356 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 STARP49675 285 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 GRB2P62993 217 aaKnown RBP10.58□□□□□ -0.72
LMNA-224ENST00000515711 INSL4Q14641 139 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 RNPS1Q15287 305 aaKnown RBP10.58□□□□□ -0.72
LMNA-224ENST00000515711 WDR38Q5JTN6 314 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 LRFN4Q6PJG9 635 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 ZNF704Q6ZNC4 412 aaPredicted RBP10.58□□□□□ -0.72
LMNA-224ENST00000515711 CHMP1BQ7LBR1 199 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 AAED1Q7RTV5 226 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.58□□□□□ -0.72
LMNA-224ENST00000515711 CATSPERDQ86XM0 798 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 ZIC4Q8N9L1 334 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 OR13C5Q8NGS8 318 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 SLAMF6Q96DU3 332 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 DERL3Q96Q80 235 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 OR14A2Q96R54 314 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 CCDC32Q9BV29 185 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 LDAHQ9H6V9 325 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 GDF2Q9UK05 429 aaPredicted RBP10.58□□□□□ -0.72
LMNA-224ENST00000515711 ING1Q9UK53 422 aaPredicted RBP10.58□□□□□ -0.72
LMNA-224ENST00000515711 UGT2A1Q9Y4X1 527 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 KCNMB2Q9Y691 235 aa10.58□□□□□ -0.72
LMNA-224ENST00000515711 TNRC6AQ8NDV7 1962 aaKnown RBP10.57□□□□□ -0.72
LMNA-224ENST00000515711 TRGV5A0A0B4J1U4 118 aa10.57□□□□□ -0.72
LMNA-224ENST00000515711 SHISA3A0PJX4 238 aa10.57□□□□□ -0.72
LMNA-224ENST00000515711 NOTOA8MTQ0 251 aa10.57□□□□□ -0.72
LMNA-224ENST00000515711 H0YC42 278 aa10.57□□□□□ -0.72
LMNA-224ENST00000515711 J3QRK9 145 aa10.57□□□□□ -0.72
LMNA-224ENST00000515711 TFECO14948 347 aaPredicted RBP10.57□□□□□ -0.72
LMNA-224ENST00000515711 SRSF10O75494 262 aaKnown RBP10.57□□□□□ -0.72
LMNA-224ENST00000515711 ISG15P05161 165 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms