RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 MOSPD3O75425 235 aa11.58□□□□□ -0.56
SMAD1-215ENST00000515385 LEFTY1O75610 366 aa11.58□□□□□ -0.56
SMAD1-215ENST00000515385 CST4P01036 141 aa11.58□□□□□ -0.56
SMAD1-215ENST00000515385 LRG1P02750 347 aa11.58□□□□□ -0.56
SMAD1-215ENST00000515385 CSTBP04080 98 aaKnown RBP11.58□□□□□ -0.56
SMAD1-215ENST00000515385 ADRB3P13945 408 aa11.58□□□□□ -0.56
SMAD1-215ENST00000515385 ZNF28P17035 718 aa11.58□□□□□ -0.56
SMAD1-215ENST00000515385 UCP2P55851 309 aa11.58□□□□□ -0.56
SMAD1-215ENST00000515385 NUTF2P61970 127 aaKnown RBP11.58□□□□□ -0.56
SMAD1-215ENST00000515385 DUSP5Q16690 384 aa11.58□□□□□ -0.56
SMAD1-215ENST00000515385 LINC01590Q5TEZ4 76 aa11.58□□□□□ -0.56
SMAD1-215ENST00000515385 ZNF765Q7L2R6 523 aa11.58□□□□□ -0.56
SMAD1-215ENST00000515385 CD163Q86VB7 1156 aa11.58□□□□□ -0.56
SMAD1-215ENST00000515385 LRRC25Q8N386 305 aaPredicted RBP11.58□□□□□ -0.56
SMAD1-215ENST00000515385 PCSK9Q8NBP7 692 aaKnown RBP11.58□□□□□ -0.56
SMAD1-215ENST00000515385 MAFIPQ8WZ33 124 aa11.58□□□□□ -0.56
SMAD1-215ENST00000515385 PTX4Q96A99 478 aa11.58□□□□□ -0.56
SMAD1-215ENST00000515385 SLC25A36Q96CQ1 311 aa11.58□□□□□ -0.56
SMAD1-215ENST00000515385 CDCA3Q99618 268 aaPredicted RBP11.58□□□□□ -0.56
SMAD1-215ENST00000515385 PTPN18Q99952 460 aa11.58□□□□□ -0.56
SMAD1-215ENST00000515385 ADAP2Q9NPF8 381 aa11.58□□□□□ -0.56
SMAD1-215ENST00000515385 DENND4CQ5VZ89 1909 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 CENPVL1A0A0U1RR11 272 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 A0A1W2PPV9 198 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 IFITM10A6NMD0 228 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 PRSS47A8MTI9 375 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 PRR32B1ATL7 298 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 H0YIZ8 118 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 RPL36A-HNRNPH2H7BZ11 118 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 STK17BO94768 372 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 YIF1AO95070 293 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 GAPDHP04406 335 aaKnown RBP11.57□□□□□ -0.56
SMAD1-215ENST00000515385 ERCC1P07992 297 aaPredicted RBP11.57□□□□□ -0.56
SMAD1-215ENST00000515385 PAX1P15863 534 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 RPL4P36578 427 aaKnown RBP11.57□□□□□ -0.56
SMAD1-215ENST00000515385 EGR3Q06889 387 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 CCL14Q16627 93 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 HIST2H3PS2Q5TEC6 136 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 VITQ6UXI7 678 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 ACBD4Q8NC06 268 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 OR7G2Q8NG99 324 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 CASTOR1Q8WTX7 329 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 ZNRF4Q8WWF5 429 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 ASB16Q96NS5 453 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 IP6K3Q96PC2 410 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 NMNAT3Q96T66 252 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 OR2S2Q9NQN1 319 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 UBQLN4Q9NRR5 601 aa11.57□□□□□ -0.56
SMAD1-215ENST00000515385 GDF2Q9UK05 429 aaPredicted RBP11.57□□□□□ -0.56
SMAD1-215ENST00000515385 A0A1B0GWA3 101 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 SYNDIG1LA6NDD5 238 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 MKRN2OSH3BPM6 223 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 OR10H2O60403 315 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 TSPAN15O95858 294 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 HSD11B2P80365 405 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 PRDX1Q06830 199 aaKnown RBP11.56□□□□□ -0.56
SMAD1-215ENST00000515385 PMPCAQ10713 525 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 DHCR24Q15392 516 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 RSU1Q15404 277 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 DEFB115Q30KQ5 88 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 DCST2Q5T1A1 773 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 Q6ZRG5 221 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 ZNF547Q8IVP9 402 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 RCBTB1Q8NDN9 531 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 GRHL3Q8TE85 626 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 BRI3BPQ8WY22 251 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 MRGPRX3Q96LB0 322 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 YPEL4Q96NS1 127 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 STACQ99469 402 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 PIGQQ9BRB3 760 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 NRSN2Q9GZP1 204 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 SPACA1Q9HBV2 294 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 MKKSQ9NPJ1 570 aaPredicted RBP11.56□□□□□ -0.56
SMAD1-215ENST00000515385 ABT1Q9ULW3 272 aaKnown RBP11.56□□□□□ -0.56
SMAD1-215ENST00000515385 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.56□□□□□ -0.56
SMAD1-215ENST00000515385 A0A1B0GVT2 93 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.56□□□□□ -0.56
SMAD1-215ENST00000515385 A0A1W2PPC1 479 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 A0A1W2PS29 197 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 AGPAT2O15120 278 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 TOX3O15405 576 aaPredicted RBP11.56□□□□□ -0.56
SMAD1-215ENST00000515385 KCNAB3O43448 404 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 JTBO76095 146 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 SERPINA5P05154 406 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 CD37P11049 281 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 PSMB5P28074 263 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 SNCAP37840 140 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 NDUFA6P56556 154 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 RAP1AP62834 184 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 FDX2Q6P4F2 183 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 LINC00114Q6XXX2 140 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 CDC20BQ86Y33 519 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 KDM8Q8N371 416 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 C19orf47Q8N9M1 422 aaKnown RBP11.56□□□□□ -0.56
SMAD1-215ENST00000515385 UBAC2Q8NBM4 344 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 GPBAR1Q8TDU6 330 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 RAB24Q969Q5 203 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 TCTN2Q96GX1 697 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 DCBLD2Q96PD2 775 aa11.56□□□□□ -0.56
SMAD1-215ENST00000515385 WSB2Q9NYS7 404 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms