RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 SNX31Q8N9S9 440 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 SPATA4Q8NEY3 305 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 OR13C2Q8NGS9 318 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 OR4S2Q8NH73 311 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 COQ8AQ8NI60 647 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 FAM81AQ8TBF8 368 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 SHC3Q92529 594 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 CREB3L1Q96BA8 519 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 TIMM17AQ99595 171 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 FOXC2Q99958 501 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 SH3GL3Q99963 347 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 MRPL37Q9BZE1 423 aaKnown RBP1.13□□□□□ -2.23
NEDD4-211ENST00000514893 PKIBQ9C010 78 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 HMG20AQ9NP66 347 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 FGF20Q9NP95 211 aaPredicted RBP1.13□□□□□ -2.23
NEDD4-211ENST00000514893 TMEM9BQ9NQ34 198 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 FBXO6Q9NRD1 293 aaPredicted RBP1.13□□□□□ -2.23
NEDD4-211ENST00000514893 ZNF355PQ9NSJ1 428 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 UXTQ9UBK9 157 aaPredicted RBP1.13□□□□□ -2.23
NEDD4-211ENST00000514893 PITPNC1Q9UKF7 332 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 PSG8Q9UQ74 426 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 STARD10Q9Y365 291 aa1.13□□□□□ -2.23
NEDD4-211ENST00000514893 CSDC2Q9Y534 153 aaKnown RBP1.13□□□□□ -2.23
NEDD4-211ENST00000514893 COL27A1Q8IZC6 1860 aaPredicted RBP1.12□□□□□ -2.23
NEDD4-211ENST00000514893 LTBP4Q8N2S1 1624 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 USP47Q96K76 1375 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 WDR62O43379 1518 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 TRAV19A0A0A6YYK7 116 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 IGHV3-66A0A0C4DH42 116 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 A0A1B0GVX0 72 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 A0A1B0GW55 424 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 OR6C74A6NCV1 312 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 C16orf90A8MZG2 172 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 SPECC1L-ADORA2AF8WAN1 911 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 TEX46H3BTG2 121 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 EIF3HO15372 352 aaKnown RBP eCLIP1.12□□□□□ -2.23
NEDD4-211ENST00000514893 NUPL2O15504 423 aaKnown RBP1.12□□□□□ -2.23
NEDD4-211ENST00000514893 EEDO75530 441 aaKnown RBP1.12□□□□□ -2.23
NEDD4-211ENST00000514893 OR2J3O76001 311 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 SRP72O76094 671 aaKnown RBP1.12□□□□□ -2.23
NEDD4-211ENST00000514893 CST1P01037 141 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 IL4P05112 153 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 CRYGBP07316 175 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 CT62P0C5K7 136 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 POLR2MP0CAP2 368 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 DUX4L2P0CJ85 424 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 DUX4L3P0CJ86 424 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 DUX4L5P0CJ88 424 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 DUX4L6P0CJ89 424 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 DUX4L7P0CJ90 424 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 OR5H8P0DN80 308 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 CD37P11049 281 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 RAB3BP20337 219 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 WARSP23381 471 aaKnown RBP1.12□□□□□ -2.23
NEDD4-211ENST00000514893 DTYMKP23919 212 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 CALRP27797 417 aaKnown RBP1.12□□□□□ -2.23
NEDD4-211ENST00000514893 VHLP40337 213 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 NAA10P41227 235 aaPredicted RBP1.12□□□□□ -2.23
NEDD4-211ENST00000514893 SLC11A1P49279 550 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 CSNK1EP49674 416 aaKnown RBP1.12□□□□□ -2.23
NEDD4-211ENST00000514893 ACLYP53396 1101 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 UBE2NP61088 152 aaKnown RBP1.12□□□□□ -2.23
NEDD4-211ENST00000514893 STXBP1P61764 594 aaKnown RBP1.12□□□□□ -2.23
NEDD4-211ENST00000514893 RPL23AP62750 156 aaKnown RBP1.12□□□□□ -2.23
NEDD4-211ENST00000514893 PITPNAQ00169 270 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 SLC39A6Q13433 755 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 DGCR6Q14129 220 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 RCN1Q15293 331 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 HSP90AB3PQ58FF7 597 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 THEM4Q5T1C6 240 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 PRAMEF20Q5VT98 475 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 SAXO2Q658L1 398 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 SPECC1LQ69YQ0 1117 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 DUX4L9Q6RFH8 374 aaPredicted RBP1.12□□□□□ -2.23
NEDD4-211ENST00000514893 LYPD2Q6UXB3 125 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 SNX20Q7Z614 316 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 TMEM135Q86UB9 458 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 EGFL6Q8IUX8 553 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 STPG2Q8N412 459 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 MS4A15Q8N5U1 240 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 OR56B2PQ8NGI1 322 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 OR10G4Q8NGN3 311 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 OR10R2Q8NGX6 335 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 GPR151Q8TDV0 419 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 PIBF1Q8WXW3 757 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 N4BP2L2Q92802 583 aaPredicted RBP1.12□□□□□ -2.23
NEDD4-211ENST00000514893 NEURL3Q96EH8 262 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 L3HYPDHQ96EM0 354 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 DYNLL2Q96FJ2 89 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 DNAJC1Q96KC8 554 aaKnown RBP1.12□□□□□ -2.23
NEDD4-211ENST00000514893 MICU1Q9BPX6 476 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 SYNDIG1Q9H7V2 258 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 ANKRA2Q9H9E1 313 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 SLC38A10Q9HBR0 1119 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 ISYNA1Q9NPH2 558 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 DUX4Q9UBX2 424 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 ASB3Q9Y575 518 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 CAMTA1Q9Y6Y1 1673 aa1.12□□□□□ -2.23
NEDD4-211ENST00000514893 LRP4O75096 1905 aa1.11□□□□□ -2.23
NEDD4-211ENST00000514893 CARMIL3Q8ND23 1372 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms