RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SNX3O60493 162 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 SLC16A7O60669 478 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 KHDRBS3O75525 346 aaKnown RBP10.18□□□□□ -0.78
MED28-203ENST00000503945 RP2O75695 350 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 SCG5P05408 212 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 GAAP10253 952 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 COX5BP10606 129 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 SDHAP31040 664 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 RPS6KA3P51812 740 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 LMO4P61968 165 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 LCN6P62502 163 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 SLC3A1Q07837 685 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 SCRN3Q0VDG4 424 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 ENDOGQ14249 297 aaKnown RBP10.18□□□□□ -0.78
MED28-203ENST00000503945 ACSM5Q6NUN0 579 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 USP51Q70EK9 711 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 GLB1L2Q8IW92 636 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 RNF148Q8N7C7 305 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 OR51F2Q8NH61 342 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 ELMOD3Q96FG2 381 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 C7orf34Q96L11 122 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 DIRC2Q96SL1 478 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 EMC7Q9NPA0 242 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 NRIP3Q9NQ35 241 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 TBCCD1Q9NVR7 557 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 CGGBP1Q9UFW8 167 aaPredicted RBP10.18□□□□□ -0.78
MED28-203ENST00000503945 SIGLEC7Q9Y286 467 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 COA3Q9Y2R0 106 aaPredicted RBP10.18□□□□□ -0.78
MED28-203ENST00000503945 DYSFO75923 2080 aa10.18□□□□□ -0.78
MED28-203ENST00000503945 TEX13CA0A0J9YWL9 993 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 CLDN25C9JDP6 229 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 SGCEO43556 437 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 ICMTO60725 284 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 ABHD16AO95870 558 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 IGHV1-46P01743 117 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 MSMBP08118 114 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 ZNF26P17031 533 aaPredicted RBP10.17□□□□□ -0.78
MED28-203ENST00000503945 GSTM3P21266 225 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 IFNGR2P38484 337 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 MPV17P39210 176 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 OMPP47874 163 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 CENPAP49450 140 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 MMP15P51511 669 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 LSM6P62312 80 aaKnown RBP10.17□□□□□ -0.78
MED28-203ENST00000503945 PSG7Q13046 419 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 SCGB2A2Q13296 93 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 ZMAT1Q5H9K5 638 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 AVPI1Q5T686 147 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 FAM122BQ7Z309 247 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 RFLNBQ8N5W9 214 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 TEX29Q8N6K0 151 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 OR5L1Q8NGL2 311 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 IPCEF1Q8WWN9 437 aaPredicted RBP10.17□□□□□ -0.78
MED28-203ENST00000503945 PTP4A1Q93096 173 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 RAB39BQ96DA2 213 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 COG8Q96MW5 612 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 LRRC37BQ96QE4 947 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 CDRT15Q96T59 188 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 OCEL1Q9H607 264 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 LPAR2Q9HBW0 351 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 PLEK2Q9NYT0 353 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 IL20RAQ9UHF4 553 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 TMCC3Q9ULS5 477 aa10.17□□□□□ -0.78
MED28-203ENST00000503945 TRAV20A0A0B4J274 112 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 TRBV4-1A0A0J9YWV2 114 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 FAM157AC9JC47 383 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 H3BSA7 217 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 SOCS2O14508 198 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 TCF21O43680 179 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 TIMM8AO60220 97 aaPredicted RBP10.16□□□□□ -0.78
MED28-203ENST00000503945 DIRAS1O95057 198 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 GADD45GO95257 159 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 MPZL1O95297 269 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 HSD17B1P14061 328 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 CTLA4P16410 223 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 TNFSF4P23510 183 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 CRABP1P29762 137 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 HTR5AP47898 357 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 AQP6Q13520 282 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 KRR1Q13601 381 aaKnown RBP10.16□□□□□ -0.78
MED28-203ENST00000503945 SEC23BQ15437 767 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 RFX4Q33E94 735 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 MESTQ5EB52 335 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 MTX3Q5HYI7 312 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 SAMD4BQ5PRF9 694 aaKnown RBP10.16□□□□□ -0.78
MED28-203ENST00000503945 SMARCD3Q6STE5 483 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 RINLQ6ZS11 566 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 ADCK1Q86TW2 530 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 GTF3AQ92664 365 aaKnown RBP10.16□□□□□ -0.78
MED28-203ENST00000503945 RASD2Q96D21 266 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 CMBLQ96DG6 245 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 RSRC1Q96IZ7 334 aaKnown RBP10.16□□□□□ -0.78
MED28-203ENST00000503945 ERMAPQ96PL5 475 aaPredicted RBP10.16□□□□□ -0.78
MED28-203ENST00000503945 GPX7Q96SL4 187 aaPredicted RBP10.16□□□□□ -0.78
MED28-203ENST00000503945 NUAK2Q9H093 628 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 SYT4Q9H2B2 425 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 ZNF665Q9H7R5 613 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 MSL2Q9HCI7 577 aa10.16□□□□□ -0.78
MED28-203ENST00000503945 SRA1Q9HD15 236 aaKnown RBP10.16□□□□□ -0.78
MED28-203ENST00000503945 NDE1Q9NXR1 346 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms