RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 DCAF13Q9NV06 445 aaKnown RBP8.17□□□□□ -1.1
MSH5-218ENST00000494646 HIF1ANQ9NWT6 349 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 NDUFAF4Q9P032 175 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 ABCD2Q9UBJ2 740 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 AURKCQ9UQB9 309 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 COA3Q9Y2R0 106 aaPredicted RBP8.17□□□□□ -1.1
MSH5-218ENST00000494646 GRIP1Q9Y3R0 1128 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 IER3IP1Q9Y5U9 82 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 IGHV1-69-2A0A0G2JMI3 117 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 TEX13CA0A0J9YWL9 993 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 PLSCR5A0PG75 271 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 PRSS37A4D1T9 235 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 SOCS2O14508 198 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 SNX3O60493 162 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 SLC16A7O60669 478 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 NDUFB2O95178 105 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 IGHV1-46P01743 117 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 GAAP10253 952 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 CTLA4P16410 223 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 RHCEP18577 417 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 CDKN2AP42771 156 aaKnown RBP8.16□□□□□ -1.1
MSH5-218ENST00000494646 OMPP47874 163 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 MMP15P51511 669 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 ARHGDIAP52565 204 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 DVL1P1P54792 670 aaPredicted RBP8.16□□□□□ -1.1
MSH5-218ENST00000494646 MRPS11P82912 194 aaKnown RBP8.16□□□□□ -1.1
MSH5-218ENST00000494646 TEKQ02763 1124 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 KRT72Q14CN4 511 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 HFEQ30201 348 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 FAM205BPQ63HN1 556 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 FAHD2BQ6P2I3 314 aaPredicted RBP8.16□□□□□ -1.1
MSH5-218ENST00000494646 FAM122BQ7Z309 247 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.16□□□□□ -1.1
MSH5-218ENST00000494646 SYT9Q86SS6 491 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 GLCCI1Q86VQ1 547 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 FAHD2AQ96GK7 314 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 PYURFQ96I23 114 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 RSRC1Q96IZ7 334 aaKnown RBP8.16□□□□□ -1.1
MSH5-218ENST00000494646 LRRC37BQ96QE4 947 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 CDRT15Q96T59 188 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 NUAK2Q9H093 628 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 SAP30LQ9HAJ7 183 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 ELOVL3Q9HB03 270 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 SRA1Q9HD15 236 aaKnown RBP8.16□□□□□ -1.1
MSH5-218ENST00000494646 NRIP3Q9NQ35 241 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 NKIRAS2Q9NYR9 191 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 KLHL21Q9UJP4 597 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 SIGLEC7Q9Y286 467 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 TMEM5Q9Y2B1 443 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 STARD10Q9Y365 291 aa8.16□□□□□ -1.1
MSH5-218ENST00000494646 TANC2Q9HCD6 1990 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 A0A1W2PRQ8 180 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 UNC119BA6NIH7 251 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 ZSCAN5BA6NJL1 495 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 ATP8B1O43520 1251 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 TIMM8AO60220 97 aaPredicted RBP8.15□□□□□ -1.1
MSH5-218ENST00000494646 DOK2O60496 412 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 KHDRBS3O75525 346 aaKnown RBP8.15□□□□□ -1.1
MSH5-218ENST00000494646 PPP1R3DO95685 299 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 ABHD16AO95870 558 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 TFP02787 698 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 MSMBP08118 114 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 PRDX6P30041 224 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 THBS2P35442 1172 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 HTR5AP47898 357 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 FXYD6P3P58550 94 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 PSG7Q13046 419 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 KRR1Q13601 381 aaKnown RBP8.15□□□□□ -1.1
MSH5-218ENST00000494646 DGCR6Q14129 220 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 MBNL2Q5VZF2 373 aaKnown RBP8.15□□□□□ -1.1
MSH5-218ENST00000494646 ARL9Q6T311 187 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 UNQ6126/PRO20091Q6UXV3 157 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 PTCHD4Q6ZW05 846 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 ZER1Q7Z7L7 766 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 TMEM186Q96B77 213 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 CMBLQ96DG6 245 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 ELMOD3Q96FG2 381 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 TSSK2Q96PF2 358 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 ERMAPQ96PL5 475 aaPredicted RBP8.15□□□□□ -1.1
MSH5-218ENST00000494646 DCLRE1CQ96SD1 692 aaKnown RBP8.15□□□□□ -1.1
MSH5-218ENST00000494646 C19orf24Q9BVV8 132 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 SYT4Q9H2B2 425 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 ANKRD19PQ9H560 264 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 METTL17Q9H7H0 456 aaPredicted RBP8.15□□□□□ -1.1
MSH5-218ENST00000494646 ZNF665Q9H7R5 613 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 GORASP2Q9H8Y8 452 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 SPAG4Q9NPE6 437 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 ARL8BQ9NVJ2 186 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 PLEK2Q9NYT0 353 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 SAMD4AQ9UPU9 718 aaKnown RBP8.15□□□□□ -1.1
MSH5-218ENST00000494646 WIPI2Q9Y4P8 454 aa8.15□□□□□ -1.1
MSH5-218ENST00000494646 DOCK11Q5JSL3 2073 aa8.15□□□□□ -1.11
MSH5-218ENST00000494646 FBN3Q75N90 2809 aa8.15□□□□□ -1.11
MSH5-218ENST00000494646 ISPDA4D126 451 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 CLDN25C9JDP6 229 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 DCTN6O00399 190 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 SGCEO43556 437 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 PLPP2O43688 288 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 AHCYL1O43865 530 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 RGS9O75916 674 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms