RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SCN1AP35498 2009 aa1.9□□□□□ -2.11
ITGB1-216ENST00000493758 GLYATL1P3A0A0U1RQE8 302 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 ZNF716A6NP11 495 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 K7EM74 188 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 LGALS9O00182 355 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 SURF6O75683 361 aaKnown RBP1.89□□□□□ -2.11
ITGB1-216ENST00000493758 SERPIND1P05546 499 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 IL1RNP18510 177 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 CASP14P31944 242 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 FOXN2P32314 431 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 CCNHP51946 323 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-216ENST00000493758 UBE2NP61088 152 aaKnown RBP1.89□□□□□ -2.11
ITGB1-216ENST00000493758 ACTG2P63267 376 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 ECH1Q13011 328 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 SRSF5Q13243 272 aaKnown RBP1.89□□□□□ -2.11
ITGB1-216ENST00000493758 PTPN20Q4JDL3 420 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 ANKRD26P1Q6NSI1 321 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 ZNF547Q8IVP9 402 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 WDFY1Q8IWB7 410 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 LRRC52Q8N7C0 313 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 OR8J1Q8NGP2 316 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 OR2A1Q8NGT9 310 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 ZCCHC13Q8WW36 166 aaKnown RBP1.89□□□□□ -2.11
ITGB1-216ENST00000493758 PKNOX2Q96KN3 472 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 ZNF488Q96MN9 340 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 TBL1YQ9BQ87 522 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 FRMD8P1Q9BZ68 369 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-216ENST00000493758 ZNF229Q9UJW7 825 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 LSM7Q9UK45 103 aaKnown RBP1.89□□□□□ -2.11
ITGB1-216ENST00000493758 NUP50Q9UKX7 468 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 GOLT1BQ9Y3E0 138 aa1.89□□□□□ -2.11
ITGB1-216ENST00000493758 TSSC4Q9Y5U2 329 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-216ENST00000493758 IGLV1-36A0A0B4J1U3 117 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 FOXE1O00358 373 aaPredicted RBP1.88□□□□□ -2.11
ITGB1-216ENST00000493758 IGKV1D-16P01601 117 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 IGHDP01880 384 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 CTSLP07711 333 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 CD3GP09693 182 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 SYNJ2BPP57105 145 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 CRADDP78560 199 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 ADARB1P78563 741 aaKnown RBP1.88□□□□□ -2.11
ITGB1-216ENST00000493758 TGFBIQ15582 683 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 OR7A5Q15622 319 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 METTL13Q8N6R0 699 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 APCDD1LQ8NCL9 501 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 B3GNT7Q8NFL0 401 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 OR13G1Q8NGZ3 307 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 KLF14Q8TD94 323 aaPredicted RBP1.88□□□□□ -2.11
ITGB1-216ENST00000493758 NT5C3BQ969T7 300 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 TUBGCP3Q96CW5 907 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 ILKAPQ9H0C8 392 aaPredicted RBP1.88□□□□□ -2.11
ITGB1-216ENST00000493758 NT5C3AQ9H0P0 336 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 LRRC40Q9H9A6 602 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 SUN2Q9UH99 717 aa1.88□□□□□ -2.11
ITGB1-216ENST00000493758 FBN1P35555 2871 aaKnown RBP1.87□□□□□ -2.11
ITGB1-216ENST00000493758 IGHV7-4-1A0A0J9YVY3 117 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 UBXN8O00124 270 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 REM1O75628 298 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 OR8U9P0C7N5 309 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 CEACAM3P40198 252 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 NSG1P42857 185 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 TPMTP51580 245 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 ARFIP1P53367 373 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 FLI1Q01543 452 aaPredicted RBP1.87□□□□□ -2.11
ITGB1-216ENST00000493758 TAF9Q16594 264 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 RNASE13Q5GAN3 156 aaKnown RBP1.87□□□□□ -2.11
ITGB1-216ENST00000493758 UBE2UQ5VVX9 321 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 H3F3CQ6NXT2 135 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 CERS6Q6ZMG9 384 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 SNX20Q7Z614 316 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 GPATCH11Q8N954 259 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 EIF1ADQ8N9N8 165 aaKnown RBP1.87□□□□□ -2.11
ITGB1-216ENST00000493758 FBXL13Q8NEE6 735 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 SPATA4Q8NEY3 305 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 DUS3LQ96G46 650 aaKnown RBP1.87□□□□□ -2.11
ITGB1-216ENST00000493758 ZBTB18Q99592 522 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 PLA2G12AQ9BZM1 189 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 EXOSC4Q9NPD3 245 aaKnown RBP1.87□□□□□ -2.11
ITGB1-216ENST00000493758 KCNJ16Q9NPI9 418 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 C8orf17Q9NRJ1 99 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 EXTL2Q9UBQ6 330 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 ENOPH1Q9UHY7 261 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 CARHSP1Q9Y2V2 147 aaKnown RBP1.87□□□□□ -2.11
ITGB1-216ENST00000493758 CBY1Q9Y3M2 126 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 SHANK1Q9Y566 2161 aa1.87□□□□□ -2.11
ITGB1-216ENST00000493758 OR6C74A6NCV1 312 aa1.86□□□□□ -2.11
ITGB1-216ENST00000493758 CHST10O43529 356 aa1.86□□□□□ -2.11
ITGB1-216ENST00000493758 NDUFB10O96000 172 aa1.86□□□□□ -2.11
ITGB1-216ENST00000493758 ZNF688P0C7X2 276 aa1.86□□□□□ -2.11
ITGB1-216ENST00000493758 RAB3AP20336 220 aa1.86□□□□□ -2.11
ITGB1-216ENST00000493758 DCKP27707 260 aa1.86□□□□□ -2.11
ITGB1-216ENST00000493758 CDH6P55285 790 aa1.86□□□□□ -2.11
ITGB1-216ENST00000493758 ACTR1AP61163 376 aa1.86□□□□□ -2.11
ITGB1-216ENST00000493758 IFT88Q13099 833 aa1.86□□□□□ -2.11
ITGB1-216ENST00000493758 ZNF726P1Q15940 193 aa1.86□□□□□ -2.11
ITGB1-216ENST00000493758 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
ITGB1-216ENST00000493758 FAM222AQ5U5X8 452 aa1.86□□□□□ -2.11
ITGB1-216ENST00000493758 CENPPQ6IPU0 288 aa1.86□□□□□ -2.11
ITGB1-216ENST00000493758 DCPSQ96C86 337 aaKnown RBP1.86□□□□□ -2.11
ITGB1-216ENST00000493758 RACGAP1Q9H0H5 632 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms