RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 RFLNBQ8N5W9 214 aa12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 SNX33Q8WV41 574 aa12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 SPRYD4Q8WW59 207 aaPredicted RBP12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 TRMT61AQ96FX7 289 aaKnown RBP12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 GMPPAQ96IJ6 420 aaPredicted RBP12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 C4orf36Q96KX1 117 aa12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 WDFY2Q96P53 400 aa12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 TTTY10Q9BZA0 68 aa12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 SLCO5A1Q9H2Y9 848 aa12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 ISG20L2Q9H9L3 353 aaKnown RBP12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 GLRX2Q9NS18 164 aa12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 DOCK7Q96N67 2140 aa12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 SPENQ96T58 3664 aaKnown RBP12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 TLN1Q9Y490 2541 aaKnown RBP12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 KALRNO60229 2985 aa12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 CHD6Q8TD26 2715 aa12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 CACNA1CQ13936 2221 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 FREM1Q5H8C1 2179 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 OR6C65A6NJZ3 312 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 PHYHO14832 338 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 UPK3AO75631 287 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 APOA1P02647 267 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 MT-ND5P03915 603 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 ALOX5APP20292 161 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 CDAP32320 146 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 CAPZA2P47755 286 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 ZNF84P51523 738 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 KLRB1Q12918 225 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 ACSF3Q4G176 576 aaPredicted RBP12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 CDONQ4KMG0 1287 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 OTPQ5XKR4 325 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 ZNF585AQ6P3V2 769 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 NCCRP1Q6ZVX7 275 aaPredicted RBP12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 SYS1Q8N2H4 156 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 OR10H5Q8NGA6 315 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 THEM6Q8WUY1 208 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 C11orf40Q8WZ69 217 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 WNT2BQ93097 391 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 SNRNP40Q96DI7 357 aaKnown RBP12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 ALKBH3Q96Q83 286 aaPredicted RBP12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 RBM24Q9BX46 236 aaKnown RBP12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 CRLF2Q9HC73 371 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 ISYNA1Q9NPH2 558 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 KCNG2Q9UJ96 466 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 J3QLW9 94 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 TMCC2O75069 709 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 KRT33AO76009 404 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 TPOP07202 933 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 SFTPCP11686 197 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 GABRA1P14867 456 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 ZNF19P17023 458 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 AGTR1P30556 359 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 TDGF1P3P51864 188 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 TPTEP56180 551 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 OR12D2P58182 307 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 ACSM1Q08AH1 577 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 PCK2Q16822 640 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 TEX30Q5JUR7 227 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 SLC18B1Q6NT16 456 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 CCBE1Q6UXH8 406 aaPredicted RBP12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 AKAP14Q86UN6 197 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 ZNF454Q8N9F8 522 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 APH1AQ96BI3 265 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 SLX1AQ9BQ83 275 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 LINC00470Q9BZP3 86 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 BABAM2Q9NXR7 383 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 KLHDC2Q9Y2U9 406 aa12.43□□□□□ -0.42
PDZRN3-210ENST00000492909 IQCMA0A1B0GVH7 501 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 FIGNL2A6NMB9 653 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 WDR1O75083 606 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 IL1AP01583 271 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 PSKH1P11801 424 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 PTGER4P35408 488 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 BDH1Q02338 343 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 KCNMB1Q16558 191 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 TP53I3Q53FA7 332 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 TSPO2Q5TGU0 170 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 LIPKQ5VXJ0 399 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 NSUN5P2Q63ZY6 315 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 FOXL2NBQ6ZUU3 175 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 VASH1Q7L8A9 365 aaPredicted RBP12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 KLBQ86Z14 1044 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 ZNF100Q8IYN0 542 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 SETD6Q8TBK2 473 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 CPT1CQ8TCG5 803 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 ASB17Q8WXJ9 295 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 TTYH2Q9BSA4 534 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 NELFAQ9H3P2 528 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 TRIM36Q9NQ86 728 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 SNTG1Q9NSN8 517 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 TXNL4BQ9NX01 149 aaKnown RBP12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 POLR1DQ9Y2S0 133 aa12.42□□□□□ -0.42
PDZRN3-210ENST00000492909 CD8B2A6NJW9 211 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 MAGEB4O15481 346 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 SS18L1O75177 396 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 LALBAP00709 142 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 ABOP16442 354 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 MSR1P21757 451 aa12.41□□□□□ -0.42
PDZRN3-210ENST00000492909 MRPS34P82930 218 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms