RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 DOK2O60496 412 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 IGHV1-46P01743 117 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 SEMG1P04279 462 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 HSD17B1P14061 328 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 ARHGDIAP52565 204 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 GYS2P54840 703 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 TEKQ02763 1124 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 SCRN3Q0VDG4 424 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 AVPI1Q5T686 147 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 OTPQ5XKR4 325 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 GLCCI1Q86VQ1 547 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 PGAM4Q8N0Y7 254 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 PYURFQ96I23 114 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 RERGLQ9H628 205 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 LPAR2Q9HBW0 351 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 IER3IP1Q9Y5U9 82 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 PLSCR5A0PG75 271 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 ZSCAN5BA6NJL1 495 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 H3BSA7 217 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 SGCEO43556 437 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 SLC16A7O60669 478 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 ABHD16AO95870 558 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 GAAP10253 952 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 COX5BP10606 129 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 ITGA2P17301 1181 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 MSX2P35548 267 aaPredicted RBP19.57■□□□□ 0.72
COL9A3-213ENST00000489045 HTR5AP47898 357 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 LMO4P61968 165 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 GNGT1P63211 74 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 MVKQ03426 396 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 FAM209AQ5JX71 171 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 SAMD4BQ5PRF9 694 aaKnown RBP19.57■□□□□ 0.72
COL9A3-213ENST00000489045 ARL9Q6T311 187 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 RINLQ6ZS11 566 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 PTCHD4Q6ZW05 846 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 ADCK1Q86TW2 530 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 GPA33Q99795 319 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 ARL8BQ9NVJ2 186 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 VSX1Q9NZR4 365 aaPredicted RBP19.57■□□□□ 0.72
COL9A3-213ENST00000489045 COA3Q9Y2R0 106 aaPredicted RBP19.57■□□□□ 0.72
COL9A3-213ENST00000489045 CACNG2Q9Y698 323 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 FBN3Q75N90 2809 aa19.57■□□□□ 0.72
COL9A3-213ENST00000489045 KHDRBS3O75525 346 aaKnown RBP19.56■□□□□ 0.72
COL9A3-213ENST00000489045 PCMT1P22061 227 aa19.56■□□□□ 0.72
COL9A3-213ENST00000489045 SRP14P37108 136 aaKnown RBP19.56■□□□□ 0.72
COL9A3-213ENST00000489045 SRSF2Q01130 221 aaKnown RBP19.56■□□□□ 0.72
COL9A3-213ENST00000489045 SPIBQ01892 262 aa19.56■□□□□ 0.72
COL9A3-213ENST00000489045 AQP6Q13520 282 aa19.56■□□□□ 0.72
COL9A3-213ENST00000489045 KRTAP24-1Q3LI83 254 aa19.56■□□□□ 0.72
COL9A3-213ENST00000489045 DPY19L2P2Q6ZN68 376 aa19.56■□□□□ 0.72
COL9A3-213ENST00000489045 VASH1Q7L8A9 365 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-213ENST00000489045 GLB1L2Q8IW92 636 aa19.56■□□□□ 0.72
COL9A3-213ENST00000489045 CD300AQ9UGN4 299 aa19.56■□□□□ 0.72
COL9A3-213ENST00000489045 TAGLN3Q9UI15 199 aa19.56■□□□□ 0.72
COL9A3-213ENST00000489045 ARPC2O15144 300 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 GADD45GO95257 159 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 MPZL1O95297 269 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 TXNDC12O95881 172 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 MSMBP08118 114 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 RPS6KA3P51812 740 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 SMIM11AP58511 58 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 HFEQ30201 348 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 SMARCD3Q6STE5 483 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 FANK1Q8TC84 345 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 TMEM186Q96B77 213 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 ELMOD3Q96FG2 381 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 NSMCE2Q96MF7 247 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 CDRT15Q96T59 188 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 REPIN1Q9BWE0 567 aaKnown RBP19.55■□□□□ 0.72
COL9A3-213ENST00000489045 NUAK2Q9H093 628 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 POFUT1Q9H488 388 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 CYSLTR2Q9NS75 346 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 HIF1ANQ9NWT6 349 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 PLEK2Q9NYT0 353 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 ASH2LQ9UBL3 628 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 CGGBP1Q9UFW8 167 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-213ENST00000489045 ARL2BPQ9Y2Y0 163 aa19.55■□□□□ 0.72
COL9A3-213ENST00000489045 CLDN25C9JDP6 229 aa19.54■□□□□ 0.72
COL9A3-213ENST00000489045 PPP1R3DO95685 299 aa19.54■□□□□ 0.72
COL9A3-213ENST00000489045 ADH4P08319 380 aa19.54■□□□□ 0.72
COL9A3-213ENST00000489045 CDKN2AP42771 156 aaKnown RBP19.54■□□□□ 0.72
COL9A3-213ENST00000489045 LSM6P62312 80 aaKnown RBP19.54■□□□□ 0.72
COL9A3-213ENST00000489045 ZER1Q7Z7L7 766 aa19.54■□□□□ 0.72
COL9A3-213ENST00000489045 NPEPL1Q8NDH3 523 aa19.54■□□□□ 0.72
COL9A3-213ENST00000489045 MCUR1Q96AQ8 359 aa19.54■□□□□ 0.72
COL9A3-213ENST00000489045 LRRC37BQ96QE4 947 aa19.54■□□□□ 0.72
COL9A3-213ENST00000489045 ZNF665Q9H7R5 613 aa19.54■□□□□ 0.72
COL9A3-213ENST00000489045 TBCCD1Q9NVR7 557 aa19.54■□□□□ 0.72
COL9A3-213ENST00000489045 WIPI2Q9Y4P8 454 aa19.54■□□□□ 0.72
COL9A3-213ENST00000489045 TIMM8AO60220 97 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-213ENST00000489045 FABP3P05413 133 aa19.53■□□□□ 0.72
COL9A3-213ENST00000489045 GSTM3P21266 225 aa19.53■□□□□ 0.72
COL9A3-213ENST00000489045 LIPAP38571 399 aa19.53■□□□□ 0.72
COL9A3-213ENST00000489045 PSG7Q13046 419 aa19.53■□□□□ 0.72
COL9A3-213ENST00000489045 PIGWQ7Z7B1 504 aa19.53■□□□□ 0.72
COL9A3-213ENST00000489045 OR51F2Q8NH61 342 aa19.53■□□□□ 0.72
COL9A3-213ENST00000489045 SLC7A6Q92536 515 aa19.53■□□□□ 0.72
COL9A3-213ENST00000489045 TSSK2Q96PF2 358 aa19.53■□□□□ 0.72
COL9A3-213ENST00000489045 ERMAPQ96PL5 475 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-213ENST00000489045 EGLN1Q9GZT9 426 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms