RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 HTR5AP47898 357 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 CENPAP49450 140 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 MMP15P51511 669 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 MRPS11P82912 194 aaKnown RBP9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 TEKQ02763 1124 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 DBPQ10586 325 aaPredicted RBP9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 KRR1Q13601 381 aaKnown RBP9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 SEC23BQ15437 767 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 PCGF3Q3KNV8 242 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 ANKDD1AQ495B1 522 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 FAHD2BQ6P2I3 314 aaPredicted RBP9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 FAM122BQ7Z309 247 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 CMTM5Q96DZ9 223 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 FAHD2AQ96GK7 314 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 RSRC1Q96IZ7 334 aaKnown RBP9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 MYLK2Q9H1R3 596 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 SYT4Q9H2B2 425 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 METTL17Q9H7H0 456 aaPredicted RBP9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 NKIRAS2Q9NYR9 191 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 NDUFAF4Q9P032 175 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 ABCD2Q9UBJ2 740 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 AURKCQ9UQB9 309 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 TMEM5Q9Y2B1 443 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 COA3Q9Y2R0 106 aaPredicted RBP9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 GRIP1Q9Y3R0 1128 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 WIPI2Q9Y4P8 454 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 IER3IP1Q9Y5U9 82 aa9.61□□□□□ -0.87
NIPAL3-207ENST00000488155 ISPDA4D126 451 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 CLDN25C9JDP6 229 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 SGCEO43556 437 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 TIMM8AO60220 97 aaPredicted RBP9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 PTP4A3O75365 173 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 NDUFB2O95178 105 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 ITGA2P17301 1181 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 RHCEP18577 417 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 THBS2P35442 1172 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 OMPP47874 163 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 ARHGDIAP52565 204 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 KRT72Q14CN4 511 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 HFEQ30201 348 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 LIPNQ5VXI9 398 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 MBNL2Q5VZF2 373 aaKnown RBP9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 SHQ1Q6PI26 577 aaKnown RBP9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 UNQ6126/PRO20091Q6UXV3 157 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 PTCHD4Q6ZW05 846 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 PIGWQ7Z7B1 504 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 CCDC197Q8NCU1 140 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 OR51F2Q8NH61 342 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 ELMOD3Q96FG2 381 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 C7orf34Q96L11 122 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 TSSK2Q96PF2 358 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 GPA33Q99795 319 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 NDEL1Q9GZM8 345 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 ANKRD19PQ9H560 264 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 ZNF665Q9H7R5 613 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 ELOVL3Q9HB03 270 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 SPAG4Q9NPE6 437 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 DCAF13Q9NV06 445 aaKnown RBP9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 DCAF16Q9NXF7 216 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 PLEK2Q9NYT0 353 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 UBAP1Q9NZ09 502 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 METRNQ9UJH8 293 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 SIGLEC7Q9Y286 467 aa9.6□□□□□ -0.87
NIPAL3-207ENST00000488155 A0A1W2PRQ8 180 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 UNC119BA6NIH7 251 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 TCF21O43680 179 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 SNX3O60493 162 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 KHDRBS3O75525 346 aaKnown RBP9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 PPP1R3DO95685 299 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 DBHP09172 617 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 PCMT1P22061 227 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 SDHAP31040 664 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 CDKN2AP42771 156 aaKnown RBP9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 LIMS1P48059 325 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 FXYD6P3P58550 94 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 SPIBQ01892 262 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 SCRN3Q0VDG4 424 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 PSG7Q13046 419 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 DGCR6Q14129 220 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 MEP1BQ16820 701 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 VASH1Q7L8A9 365 aaPredicted RBP9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 SYT9Q86SS6 491 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 RFLNBQ8N5W9 214 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 RAB1CQ92928 201 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 TIMD4Q96H15 378 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 DCLRE1CQ96SD1 692 aaKnown RBP9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 GAL3ST1Q99999 423 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 EGLN1Q9GZT9 426 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 NUAK2Q9H093 628 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 NRIP3Q9NQ35 241 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 ASH2LQ9UBL3 628 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 NDRG4Q9ULP0 352 aaKnown RBP9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 SAMD4AQ9UPU9 718 aaKnown RBP9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 POLR1DQ9Y2S0 133 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 ARL2BPQ9Y2Y0 163 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 STARD10Q9Y365 291 aa9.59□□□□□ -0.87
NIPAL3-207ENST00000488155 LOC105371242A0A075B767 164 aa9.58□□□□□ -0.88
NIPAL3-207ENST00000488155 PLPP2O43688 288 aa9.58□□□□□ -0.88
NIPAL3-207ENST00000488155 UBOX5O94941 541 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms