RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 RP9Q8TA86 221 aaKnown RBP6.03□□□□□ -1.44
COL17A1-205ENST00000480127 KLF14Q8TD94 323 aaPredicted RBP6.03□□□□□ -1.44
COL17A1-205ENST00000480127 GTF3AQ92664 365 aaKnown RBP6.03□□□□□ -1.44
COL17A1-205ENST00000480127 HDAC2Q92769 488 aaKnown RBP6.03□□□□□ -1.44
COL17A1-205ENST00000480127 CMTM5Q96DZ9 223 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 FAM46AQ96IP4 442 aaKnown RBP6.03□□□□□ -1.44
COL17A1-205ENST00000480127 C4orf45Q96LM5 186 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF583Q96ND8 569 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 PRSS27Q9BQR3 290 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 MRI1Q9BV20 369 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF747Q9BV97 191 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 EMC7Q9NPA0 242 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 ESM1Q9NQ30 184 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 DDX28Q9NUL7 540 aaKnown RBP6.03□□□□□ -1.44
COL17A1-205ENST00000480127 KIF17Q9P2E2 1029 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 WIPI2Q9Y4P8 454 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 PCDHGB1Q9Y5G3 927 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 PKD1L1Q8TDX9 2849 aa6.03□□□□□ -1.44
COL17A1-205ENST00000480127 TGP01266 2768 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 TEX13CA0A0J9YWL9 993 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 J3KTA2 159 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 J3QLI3 93 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 SLC22A2O15244 555 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 PLPP2O43688 288 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 KHDRBS3O75525 346 aaKnown RBP6.02□□□□□ -1.45
COL17A1-205ENST00000480127 FOXH1O75593 365 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 NDUFB2O95178 105 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 LYPD3O95274 346 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 RENP00797 406 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 IGHV1-46P01743 117 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 IGHV3-13P01766 116 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 CD14P08571 375 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 COX4I1P13073 169 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 ADRA2CP18825 462 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 GATA3P23771 443 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 IFNGR2P38484 337 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 MPV17P39210 176 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 RPS6KA3P51812 740 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 SMIM11AP58511 58 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 LMO4P61968 165 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 SPIBQ01892 262 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 KRR1Q13601 381 aaKnown RBP6.02□□□□□ -1.45
COL17A1-205ENST00000480127 ZBED5Q49AG3 693 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 ESCO2Q56NI9 601 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 ARMC4Q5T2S8 1044 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 FAM27BQ5VT28 67 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 GPR139Q6DWJ6 353 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 BTNL3Q6UXE8 466 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 RFPL4BQ6ZWI9 263 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 MBOAT2Q6ZWT7 520 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 TSPYL5Q86VY4 417 aaPredicted RBP6.02□□□□□ -1.45
COL17A1-205ENST00000480127 CALHM3Q86XJ0 350 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 GLB1L2Q8IW92 636 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 ZNF101Q8IZC7 436 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 RNF113BQ8IZP6 322 aaKnown RBP6.02□□□□□ -1.45
COL17A1-205ENST00000480127 OFCC1Q8IZS5 231 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 OR5AS1Q8N127 324 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 CLDN22Q8N7P3 220 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 ZDHHC22Q8N966 263 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 OR2AJ1Q8NGZ0 328 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 OR52J3Q8NH60 311 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 FANK1Q8TC84 345 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 ACOT11Q8WXI4 607 aaPredicted RBP6.02□□□□□ -1.45
COL17A1-205ENST00000480127 C22orf15Q8WYQ4 148 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 CMBLQ96DG6 245 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 HOPXQ9BPY8 73 aaPredicted RBP6.02□□□□□ -1.45
COL17A1-205ENST00000480127 ZNF426Q9BUY5 554 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 HCAR1Q9BXC0 346 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 RSPO3Q9BXY4 272 aaPredicted RBP6.02□□□□□ -1.45
COL17A1-205ENST00000480127 MRPL13Q9BYD1 178 aaKnown RBP6.02□□□□□ -1.45
COL17A1-205ENST00000480127 WNT5BQ9H1J7 359 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 SYT4Q9H2B2 425 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 G6PC2Q9NQR9 355 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 MAN2C1Q9NTJ4 1040 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 NKIRAS2Q9NYR9 191 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 OR5V1Q9UGF6 321 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 EGFL7Q9UHF1 273 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 IL20RAQ9UHF4 553 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 TMCC3Q9ULS5 477 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 SAMD4AQ9UPU9 718 aaKnown RBP6.02□□□□□ -1.45
COL17A1-205ENST00000480127 PPP1R3CQ9UQK1 317 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 HIF3AQ9Y2N7 669 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 ADAM18Q9Y3Q7 739 aa6.02□□□□□ -1.45
COL17A1-205ENST00000480127 IGLV3-9A0A075B6K5 115 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 LOC100509620A0A075B734 347 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 A0A0G2JK05 382 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 UNC119BA6NIH7 251 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 ZSCAN5BA6NJL1 495 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 NPIPB13A6NJU9 1138 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 NPIPB4C9JG80 1138 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 H3BSA7 217 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 FXYD1O00168 92 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 IGF2P01344 180 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 IGHV2-5P01817 119 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 MMP7P09237 267 aaPredicted RBP6.01□□□□□ -1.45
COL17A1-205ENST00000480127 NCK1P16333 377 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 CRABP1P29762 137 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 WNT5AP41221 380 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 SLC6A9P48067 706 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 SRP9P49458 86 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms