RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 NSMCE2Q96MF7 247 aa12.85□□□□□ -0.35
PRKN-207ENST00000479615 DCLRE1CQ96SD1 692 aaKnown RBP12.85□□□□□ -0.35
PRKN-207ENST00000479615 SAP30LQ9HAJ7 183 aa12.85□□□□□ -0.35
PRKN-207ENST00000479615 VSX1Q9NZR4 365 aaPredicted RBP12.85□□□□□ -0.35
PRKN-207ENST00000479615 UNC119BA6NIH7 251 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 PHF1O43189 567 aaPredicted RBP12.84□□□□□ -0.35
PRKN-207ENST00000479615 SGCEO43556 437 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 NCR1O76036 304 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 GADD45GO95257 159 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 ABHD16AO95870 558 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 MMP15P51511 669 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 PPP1CBP62140 327 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 ALKBH6Q3KRA9 238 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 LIPNQ5VXI9 398 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 ZNF774Q6NX45 483 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 PIGWQ7Z7B1 504 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 MEX3DQ86XN8 651 aaKnown RBP12.84□□□□□ -0.35
PRKN-207ENST00000479615 CLDND2Q8NHS1 167 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 SLC25A40Q8TBP6 338 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 RAB1CQ92928 201 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 YIPF5Q969M3 257 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 RAB39BQ96DA2 213 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 SOX7Q9BT81 388 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 OR2J1Q9GZK6 312 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 IL1RAPQ9NPH3 570 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 CD300AQ9UGN4 299 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 TMCC3Q9ULS5 477 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 GRIP1Q9Y3R0 1128 aa12.84□□□□□ -0.35
PRKN-207ENST00000479615 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.84□□□□□ -0.35
PRKN-207ENST00000479615 TRBV4-1A0A0J9YWV2 114 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 CLDN25C9JDP6 229 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 ARPC3O15145 178 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 IDH3BO43837 385 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 DOK2O60496 412 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 SLC16A7O60669 478 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 KRT36O76013 467 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 MSMBP08118 114 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 CTLA4P16410 223 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 ZNF26P17031 533 aaPredicted RBP12.83□□□□□ -0.36
PRKN-207ENST00000479615 FPR3P25089 353 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 SLC6A6P31641 620 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 IL2RGP31785 369 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 RGS6P49758 472 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 GNGT1P63211 74 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 KCNMB1Q16558 191 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 RFX4Q33E94 735 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 PEG10Q86TG7 708 aaKnown RBP12.83□□□□□ -0.36
PRKN-207ENST00000479615 ARHGAP24Q8N264 748 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 LINC00471Q8N535 108 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 RFLNBQ8N5W9 214 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 RNF148Q8N7C7 305 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 OR52J3Q8NH60 311 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 OR51F2Q8NH61 342 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 CDRT15Q96T59 188 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 FUZQ9BT04 418 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 SYT4Q9H2B2 425 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 PLEK2Q9NYT0 353 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 KLHL21Q9UJP4 597 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 IER3IP1Q9Y5U9 82 aa12.83□□□□□ -0.36
PRKN-207ENST00000479615 TRAV20A0A0B4J274 112 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 H7C1C5 153 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 SEMG1P04279 462 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 FABP3P05413 133 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 CD55P08174 381 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 GAAP10253 952 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 TNFSF4P23510 183 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 SRP14P37108 136 aaKnown RBP12.82□□□□□ -0.36
PRKN-207ENST00000479615 HTR5AP47898 357 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 LCN6P62502 163 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 SPIBQ01892 262 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 CCNIQ14094 377 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 MTX3Q5HYI7 312 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 ACSM5Q6NUN0 579 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 RPL13AP3Q6NVV1 102 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 USP51Q70EK9 711 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 GJC3Q8NFK1 279 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 OR5L1Q8NGL2 311 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 TMEM186Q96B77 213 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 RASD2Q96D21 266 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 EMC7Q9NPA0 242 aa12.82□□□□□ -0.36
PRKN-207ENST00000479615 COA3Q9Y2R0 106 aaPredicted RBP12.82□□□□□ -0.36
PRKN-207ENST00000479615 ANK3Q12955 4377 aaKnown RBP12.82□□□□□ -0.36
PRKN-207ENST00000479615 MALRD1Q5VYJ5 2156 aa12.81□□□□□ -0.36
PRKN-207ENST00000479615 OR6C6A6NF89 314 aa12.81□□□□□ -0.36
PRKN-207ENST00000479615 SOCS2O14508 198 aa12.81□□□□□ -0.36
PRKN-207ENST00000479615 ARPC2O15144 300 aa12.81□□□□□ -0.36
PRKN-207ENST00000479615 SURF4O15260 269 aa12.81□□□□□ -0.36
PRKN-207ENST00000479615 SPRY3O43610 288 aa12.81□□□□□ -0.36
PRKN-207ENST00000479615 TIMM8AO60220 97 aaPredicted RBP12.81□□□□□ -0.36
PRKN-207ENST00000479615 OR10H3O60404 316 aa12.81□□□□□ -0.36
PRKN-207ENST00000479615 CDC14BO60729 498 aa12.81□□□□□ -0.36
PRKN-207ENST00000479615 RENP00797 406 aa12.81□□□□□ -0.36
PRKN-207ENST00000479615 NGFP01138 241 aa12.81□□□□□ -0.36
PRKN-207ENST00000479615 IGHV1-46P01743 117 aa12.81□□□□□ -0.36
PRKN-207ENST00000479615 TNFRSF1AP19438 455 aa12.81□□□□□ -0.36
PRKN-207ENST00000479615 NOS3P29474 1203 aa12.81□□□□□ -0.36
PRKN-207ENST00000479615 MPV17P39210 176 aa12.81□□□□□ -0.36
PRKN-207ENST00000479615 LMO4P61968 165 aa12.81□□□□□ -0.36
PRKN-207ENST00000479615 MXRA7P84157 204 aa12.81□□□□□ -0.36
PRKN-207ENST00000479615 GLO1Q04760 184 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms