RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 TMEM150AQ86TG1 271 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 KCNG3Q8TAE7 436 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 RAB3IL1Q8TBN0 382 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 SLC7A13Q8TCU3 470 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 RNF139Q8WU17 664 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 DCPSQ96C86 337 aaKnown RBP1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 PLIN2Q99541 437 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 RNF5Q99942 180 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 TBL1YQ9BQ87 522 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 CENPKQ9BS16 269 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 GON7Q9BXV9 100 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 CWH43Q9H720 699 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 LSM7Q9UK45 103 aaKnown RBP1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 S4R3C0 116 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 ATAD2BQ9ULI0 1458 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 CNTNAP1P78357 1384 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 PIKFYVEQ9Y2I7 2098 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 TRAV19A0A0A6YYK7 116 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 SPECC1L-ADORA2AF8WAN1 911 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 RPL36A-HNRNPH2H7BZ11 118 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 FOXE1O00358 373 aaPredicted RBP1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 ZNF207O43670 478 aaKnown RBP1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 KLHL41O60662 606 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 GCM2O75603 506 aaPredicted RBP1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 PALMO75781 387 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 CCNE2O96020 404 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 CST1P01037 141 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 OR5H8P0DN80 308 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 CELP19835 753 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 NSG1P42857 185 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 ACLYP53396 1101 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 BST1Q10588 318 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 OR7A5Q15622 319 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 PGGHGQ32M88 737 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 CEP55Q53EZ4 464 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 UBE2UQ5VVX9 321 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 SPECC1LQ69YQ0 1117 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 RNASEKQ6P5S7 137 aaKnown RBP1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 NCCRP1Q6ZVX7 275 aaPredicted RBP1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 CDR2LQ86X02 465 aaPredicted RBP1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 METTL13Q8N6R0 699 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 NECAP1Q8NC96 275 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 OR52P1PQ8NH57 321 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 LINC01560Q8TB33 94 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 ZNF502Q8TBZ5 544 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 ESR2Q92731 530 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 FLYWCH2Q96CP2 140 aaKnown RBP1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 TIMM17AQ99595 171 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 ATP5SQ99766 215 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 ZNF717Q9BY31 904 aaPredicted RBP1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 VANGL2Q9ULK5 521 aa1.75□□□□□ -2.13
ECHDC1-213ENST00000474240 CENPVL3A0A0U1RRI6 287 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 H7C0C1 242 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 CHST10O43529 356 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 SERPINA3P01011 423 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 CT45A6P0DMU7 189 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 CT45A5P0DMU8 189 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 CT45A7P0DMV0 189 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 ZNF250P15622 560 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 DCKP27707 260 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 CEACAM3P40198 252 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 ATP5OP48047 213 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 HCAR3P49019 387 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 CSNK1EP49674 416 aaKnown RBP1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 P2RX1P51575 399 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 SYNJ2BPP57105 145 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 STXBP1P61764 594 aaKnown RBP1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 CCNA1P78396 465 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 SLC25A11Q02978 314 aaKnown RBP1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 SNRNP35Q16560 246 aaKnown RBP1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 TCEAL5Q5H9L2 206 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 CT45A1Q5HYN5 189 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 C9orf135Q5VTT2 229 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 H3F3CQ6NXT2 135 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 CEMP1Q6PRD7 247 aaPredicted RBP1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 FBXW12Q6X9E4 464 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 TAS2R42Q7RTR8 314 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 CDKL3Q8IVW4 592 aaPredicted RBP1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 FBXL13Q8NEE6 735 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 OR7G2Q8NG99 324 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 OR8U1Q8NH10 309 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 CT45A3Q8NHU0 189 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 PIFOQ8TCI5 191 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 C17orf50Q8WW18 174 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 ZNF606Q8WXB4 792 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 SHC3Q92529 594 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 TCEAL3Q969E4 200 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 FBXO32Q969P5 355 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 HSD17B10Q99714 261 aaKnown RBP1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 MICU1Q9BPX6 476 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 RACGAP1Q9H0H5 632 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 HRASLS2Q9NWW9 162 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 LGALS13Q9UHV8 139 aa1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 GPATCH8Q9UKJ3 1502 aaKnown RBP1.74□□□□□ -2.13
ECHDC1-213ENST00000474240 HEATR9A2RTY3 570 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 SMCO2A6NFE2 343 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 UBXN8O00124 270 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 SIRPB1O00241 398 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 NDUFAB1O14561 156 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 RAB29O14966 203 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms