RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 HIF1ANQ9NWT6 349 aa13.05□□□□□ -0.32
COL1A1-203ENST00000471344 DCAF16Q9NXF7 216 aa13.05□□□□□ -0.32
COL1A1-203ENST00000471344 NKIRAS2Q9NYR9 191 aa13.05□□□□□ -0.32
COL1A1-203ENST00000471344 EIF3KQ9UBQ5 218 aaKnown RBP13.05□□□□□ -0.32
COL1A1-203ENST00000471344 GPR160Q9UJ42 338 aa13.05□□□□□ -0.32
COL1A1-203ENST00000471344 TMEM5Q9Y2B1 443 aa13.05□□□□□ -0.32
COL1A1-203ENST00000471344 TANC2Q9HCD6 1990 aa13.05□□□□□ -0.32
COL1A1-203ENST00000471344 C12orf71A8MTZ7 269 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 XKRYO14609 159 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 SLC16A7O60669 478 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 ICMTO60725 284 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 NDUFB2O95178 105 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 MSMBP08118 114 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 RHCEP18577 417 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 SDHAP31040 664 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 CRYBB2P43320 205 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 HTR5AP47898 357 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 ERFP50548 548 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 PCBD1P61457 104 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 VASH1Q7L8A9 365 aaPredicted RBP13.04□□□□□ -0.32
COL1A1-203ENST00000471344 GLCCI1Q86VQ1 547 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 TMEM186Q96B77 213 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 C4orf45Q96LM5 186 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 TSSK2Q96PF2 358 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 GPX7Q96SL4 187 aaPredicted RBP13.04□□□□□ -0.32
COL1A1-203ENST00000471344 C19orf24Q9BVV8 132 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 NRIP3Q9NQ35 241 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 DECR2Q9NUI1 292 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 COA3Q9Y2R0 106 aaPredicted RBP13.04□□□□□ -0.32
COL1A1-203ENST00000471344 WIPI2Q9Y4P8 454 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 IER3IP1Q9Y5U9 82 aa13.04□□□□□ -0.32
COL1A1-203ENST00000471344 UNC119BA6NIH7 251 aa13.03□□□□□ -0.32
COL1A1-203ENST00000471344 DCTN6O00399 190 aa13.03□□□□□ -0.32
COL1A1-203ENST00000471344 DEAF1O75398 565 aaPredicted RBP13.03□□□□□ -0.32
COL1A1-203ENST00000471344 PPP1R3DO95685 299 aa13.03□□□□□ -0.32
COL1A1-203ENST00000471344 ABHD16AO95870 558 aa13.03□□□□□ -0.32
COL1A1-203ENST00000471344 TFP02787 698 aa13.03□□□□□ -0.32
COL1A1-203ENST00000471344 THBS2P35442 1172 aa13.03□□□□□ -0.32
COL1A1-203ENST00000471344 SRP14P37108 136 aaKnown RBP13.03□□□□□ -0.32
COL1A1-203ENST00000471344 CDKN2AP42771 156 aaKnown RBP13.03□□□□□ -0.32
COL1A1-203ENST00000471344 GUCA1AP43080 201 aaPredicted RBP13.03□□□□□ -0.32
COL1A1-203ENST00000471344 PSG7Q13046 419 aa13.03□□□□□ -0.32
COL1A1-203ENST00000471344 MEP1BQ16820 701 aa13.03□□□□□ -0.32
COL1A1-203ENST00000471344 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.03□□□□□ -0.32
COL1A1-203ENST00000471344 ALDH16A1Q8IZ83 802 aa13.03□□□□□ -0.32
COL1A1-203ENST00000471344 LRRC37BQ96QE4 947 aa13.03□□□□□ -0.32
COL1A1-203ENST00000471344 NUAK2Q9H093 628 aa13.03□□□□□ -0.32
COL1A1-203ENST00000471344 ZNF665Q9H7R5 613 aa13.03□□□□□ -0.32
COL1A1-203ENST00000471344 VSX1Q9NZR4 365 aaPredicted RBP13.03□□□□□ -0.32
COL1A1-203ENST00000471344 ASH2LQ9UBL3 628 aa13.03□□□□□ -0.32
COL1A1-203ENST00000471344 SAMD4AQ9UPU9 718 aaKnown RBP13.03□□□□□ -0.32
COL1A1-203ENST00000471344 FAM32AQ9Y421 112 aaKnown RBP13.03□□□□□ -0.32
COL1A1-203ENST00000471344 CLDN25C9JDP6 229 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 ARPC2O15144 300 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 SGCEO43556 437 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 DCTN3O75935 186 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 UBOX5O94941 541 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 MT-ND5P03915 603 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 DBHP09172 617 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 SPIBQ01892 262 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 C1orf94Q6P1W5 598 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 Q6ZR03 302 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 C1orf229Q6ZS94 237 aaPredicted RBP13.02□□□□□ -0.33
COL1A1-203ENST00000471344 ZER1Q7Z7L7 766 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 SYT9Q86SS6 491 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 FANK1Q8TC84 345 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 CCL17Q92583 94 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 GORASP2Q9H8Y8 452 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 CD300AQ9UGN4 299 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 KLHL21Q9UJP4 597 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 AURKCQ9UQB9 309 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 STARD10Q9Y365 291 aa13.02□□□□□ -0.33
COL1A1-203ENST00000471344 PLSCR5A0PG75 271 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 OR6C6A6NF89 314 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 RER1O15258 196 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 TIMM8AO60220 97 aaPredicted RBP13.01□□□□□ -0.33
COL1A1-203ENST00000471344 KHDRBS3O75525 346 aaKnown RBP13.01□□□□□ -0.33
COL1A1-203ENST00000471344 AVPP01185 164 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 IGHV2-5P01817 119 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 T-ENOLP0DO92 83 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 HSD17B1P14061 328 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 ITGA2P17301 1181 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 SCRN3Q0VDG4 424 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 AQP6Q13520 282 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 MOGQ16653 247 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 HFEQ30201 348 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 CCDC92Q53HC0 331 aaPredicted RBP13.01□□□□□ -0.33
COL1A1-203ENST00000471344 FAM209AQ5JX71 171 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 GPR139Q6DWJ6 353 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 SMARCD3Q6STE5 483 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 GLB1L2Q8IW92 636 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 CCDC197Q8NCU1 140 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 OR51F2Q8NH61 342 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 PYURFQ96I23 114 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 METTL17Q9H7H0 456 aaPredicted RBP13.01□□□□□ -0.33
COL1A1-203ENST00000471344 ELOVL3Q9HB03 270 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 PLEK2Q9NYT0 353 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 TAGLN3Q9UI15 199 aa13.01□□□□□ -0.33
COL1A1-203ENST00000471344 NDRG4Q9ULP0 352 aaKnown RBP13.01□□□□□ -0.33
COL1A1-203ENST00000471344 GRIP1Q9Y3R0 1128 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms