RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 SDHAP31040 664 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 SRP14P37108 136 aaKnown RBP13.84□□□□□ -0.19
COL9A3-208ENST00000469802 LIPAP38571 399 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 SCRN3Q0VDG4 424 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 SEC23BQ15437 767 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 GPR139Q6DWJ6 353 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 THSD4Q6ZMP0 1018 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 VASH1Q7L8A9 365 aaPredicted RBP13.84□□□□□ -0.19
COL9A3-208ENST00000469802 RRM2BQ7LG56 351 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 RASD2Q96D21 266 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 ELMOD3Q96FG2 381 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 RSRC1Q96IZ7 334 aaKnown RBP13.84□□□□□ -0.19
COL9A3-208ENST00000469802 ELAC2Q9BQ52 826 aaKnown RBP13.84□□□□□ -0.19
COL9A3-208ENST00000469802 NDEL1Q9GZM8 345 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 SYT4Q9H2B2 425 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 LPAR2Q9HBW0 351 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 G6PC2Q9NQR9 355 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 DECR2Q9NUI1 292 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 TBCCD1Q9NVR7 557 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 VSX1Q9NZR4 365 aaPredicted RBP13.84□□□□□ -0.19
COL9A3-208ENST00000469802 SAMD4AQ9UPU9 718 aaKnown RBP13.84□□□□□ -0.19
COL9A3-208ENST00000469802 GRIP1Q9Y3R0 1128 aa13.84□□□□□ -0.19
COL9A3-208ENST00000469802 PLSCR5A0PG75 271 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 SPRY3O43610 288 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 TCF21O43680 179 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 DOK2O60496 412 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 UBOX5O94941 541 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 TXNDC12O95881 172 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 IGHV2-5P01817 119 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 MVKQ03426 396 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 AQP6Q13520 282 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 HFEQ30201 348 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 ZMAT1Q5H9K5 638 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 FGD3Q5JSP0 725 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 GLYATQ6IB77 296 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 ADCK1Q86TW2 530 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 NPEPL1Q8NDH3 523 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 LRRC37BQ96QE4 947 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 POFUT1Q9H488 388 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 GORASP2Q9H8Y8 452 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 ARHGAP32A7KAX9 2087 aa13.83□□□□□ -0.2
COL9A3-208ENST00000469802 OR6C6A6NF89 314 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 IMPA2O14732 288 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 TPD52L2O43399 206 aaKnown RBP13.82□□□□□ -0.2
COL9A3-208ENST00000469802 ATP8B1O43520 1251 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 SGCEO43556 437 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 SNX3O60493 162 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 DIRAS1O95057 198 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 ABHD16AO95870 558 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 TUBG1P23258 451 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 HTR5AP47898 357 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 ARHGDIAP52565 204 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 LSM6P62312 80 aaKnown RBP13.82□□□□□ -0.2
COL9A3-208ENST00000469802 PSG7Q13046 419 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 SPRNQ5BIV9 151 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 LIPNQ5VXI9 398 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 ARL9Q6T311 187 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 PTCHD4Q6ZW05 846 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 RNF148Q8N7C7 305 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 RAB39BQ96DA2 213 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 TIMD4Q96H15 378 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 DIRC2Q96SL1 478 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 GPA33Q99795 319 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 TUBG2Q9NRH3 451 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 ATPIF1Q9UII2 106 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 ZDHHC8Q9ULC8 765 aa13.82□□□□□ -0.2
COL9A3-208ENST00000469802 FAM32AQ9Y421 112 aaKnown RBP13.82□□□□□ -0.2
COL9A3-208ENST00000469802 SLC16A7O60669 478 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 KHDRBS3O75525 346 aaKnown RBP13.81□□□□□ -0.2
COL9A3-208ENST00000469802 PNPP00491 289 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 HSD17B1P14061 328 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 ITGA2P17301 1181 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 KITLGP21583 273 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 CDK5R2Q13319 367 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 KCNMB1Q16558 191 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 MTX3Q5HYI7 312 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 ACSM5Q6NUN0 579 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 DPY19L2P2Q6ZN68 376 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 C1orf229Q6ZS94 237 aaPredicted RBP13.81□□□□□ -0.2
COL9A3-208ENST00000469802 ZER1Q7Z7L7 766 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 GLB1L2Q8IW92 636 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 RAB1CQ92928 201 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 EGLN1Q9GZT9 426 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 METTL17Q9H7H0 456 aaPredicted RBP13.81□□□□□ -0.2
COL9A3-208ENST00000469802 MSL2Q9HCI7 577 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 ADA2Q9NZK5 511 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 ASH2LQ9UBL3 628 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 IL20RAQ9UHF4 553 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 METRNQ9UJH8 293 aa13.81□□□□□ -0.2
COL9A3-208ENST00000469802 COA3Q9Y2R0 106 aaPredicted RBP13.81□□□□□ -0.2
COL9A3-208ENST00000469802 UNC119BA6NIH7 251 aa13.8□□□□□ -0.2
COL9A3-208ENST00000469802 SOCS2O14508 198 aa13.8□□□□□ -0.2
COL9A3-208ENST00000469802 PLPP2O43688 288 aa13.8□□□□□ -0.2
COL9A3-208ENST00000469802 MPZL1O95297 269 aa13.8□□□□□ -0.2
COL9A3-208ENST00000469802 ANPEPP15144 967 aa13.8□□□□□ -0.2
COL9A3-208ENST00000469802 GSTM3P21266 225 aa13.8□□□□□ -0.2
COL9A3-208ENST00000469802 OTPQ5XKR4 325 aa13.8□□□□□ -0.2
COL9A3-208ENST00000469802 SMARCD3Q6STE5 483 aa13.8□□□□□ -0.2
COL9A3-208ENST00000469802 Q6ZR03 302 aa13.8□□□□□ -0.2
COL9A3-208ENST00000469802 SEMA6DQ8NFY4 1073 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms