RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CYSLTR2Q9NS75 346 aa16.12■□□□□ 0.17
VARS-220ENST00000461874 VSX1Q9NZR4 365 aaPredicted RBP16.12■□□□□ 0.17
VARS-220ENST00000461874 IL20RAQ9UHF4 553 aa16.12■□□□□ 0.17
VARS-220ENST00000461874 AURKCQ9UQB9 309 aa16.12■□□□□ 0.17
VARS-220ENST00000461874 FBN3Q75N90 2809 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 PLSCR5A0PG75 271 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 UNC119BA6NIH7 251 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 SPRY3O43610 288 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 SLC16A7O60669 478 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 SEMG1P04279 462 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 MSMBP08118 114 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 HSD17B1P14061 328 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 ITGA2P17301 1181 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 LIPAP38571 399 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 FXYD6P3P58550 94 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 KRT72Q14CN4 511 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 ARL9Q6T311 187 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 DPY19L2P2Q6ZN68 376 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 TMEM186Q96B77 213 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 PYURFQ96I23 114 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 GPA33Q99795 319 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 SYT4Q9H2B2 425 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 HIF1ANQ9NWT6 349 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 KLHL21Q9UJP4 597 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 IER3IP1Q9Y5U9 82 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 CACNG2Q9Y698 323 aa16.11■□□□□ 0.17
VARS-220ENST00000461874 ZSCAN5BA6NJL1 495 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 IMPA2O14732 288 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 SGCEO43556 437 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 DOK2O60496 412 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 KHDRBS3O75525 346 aaKnown RBP16.1■□□□□ 0.17
VARS-220ENST00000461874 ABHD16AO95870 558 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 TXNDC12O95881 172 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 ADH4P08319 380 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 SRP14P37108 136 aaKnown RBP16.1■□□□□ 0.17
VARS-220ENST00000461874 HTR5AP47898 357 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 SMIM11AP58511 58 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 SRSF2Q01130 221 aaKnown RBP16.1■□□□□ 0.17
VARS-220ENST00000461874 MVKQ03426 396 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 HFEQ30201 348 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 AVPI1Q5T686 147 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 VASH1Q7L8A9 365 aaPredicted RBP16.1■□□□□ 0.17
VARS-220ENST00000461874 ADCK1Q86TW2 530 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 GLB1L2Q8IW92 636 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 ELMOD3Q96FG2 381 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 REPIN1Q9BWE0 567 aaKnown RBP16.1■□□□□ 0.17
VARS-220ENST00000461874 RERGLQ9H628 205 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 LPAR2Q9HBW0 351 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 TBCCD1Q9NVR7 557 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 CGGBP1Q9UFW8 167 aaPredicted RBP16.1■□□□□ 0.17
VARS-220ENST00000461874 CD300AQ9UGN4 299 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 MAGEL2Q9UJ55 1249 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 COA3Q9Y2R0 106 aaPredicted RBP16.1■□□□□ 0.17
VARS-220ENST00000461874 V9GYQ6 96 aa16.1■□□□□ 0.17
VARS-220ENST00000461874 SOCS2O14508 198 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 MPZL1O95297 269 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 TUBG1P23258 451 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 CDKN2AP42771 156 aaKnown RBP16.09■□□□□ 0.17
VARS-220ENST00000461874 RPS6KA3P51812 740 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 LSM6P62312 80 aaKnown RBP16.09■□□□□ 0.17
VARS-220ENST00000461874 PSG7Q13046 419 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 AQP6Q13520 282 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 SAMD4BQ5PRF9 694 aaKnown RBP16.09■□□□□ 0.17
VARS-220ENST00000461874 SMARCD3Q6STE5 483 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 RINLQ6ZS11 566 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 PTCHD4Q6ZW05 846 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 ZER1Q7Z7L7 766 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 PGAM4Q8N0Y7 254 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 OR51F2Q8NH61 342 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 CDRT15Q96T59 188 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 EGLN1Q9GZT9 426 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 NUAK2Q9H093 628 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 TUBG2Q9NRH3 451 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 TAGLN3Q9UI15 199 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 ZDHHC8Q9ULC8 765 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 WIPI2Q9Y4P8 454 aa16.09■□□□□ 0.17
VARS-220ENST00000461874 CLDN25C9JDP6 229 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 GADD45GO95257 159 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 MSX2P35548 267 aaPredicted RBP16.08■□□□□ 0.16
VARS-220ENST00000461874 KCNMB1Q16558 191 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 ZMAT1Q5H9K5 638 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 MTX3Q5HYI7 312 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 OTPQ5XKR4 325 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 PIGWQ7Z7B1 504 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 NPEPL1Q8NDH3 523 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 CCL17Q92583 94 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 RAB1CQ92928 201 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 LRRC37BQ96QE4 947 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 DIRC2Q96SL1 478 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 POFUT1Q9H488 388 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 ZNF665Q9H7R5 613 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 MSL2Q9HCI7 577 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 ARL8BQ9NVJ2 186 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 PLEK2Q9NYT0 353 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 ASH2LQ9UBL3 628 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 ARL2BPQ9Y2Y0 163 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 GRIP1Q9Y3R0 1128 aa16.08■□□□□ 0.16
VARS-220ENST00000461874 OR6C6A6NF89 314 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 ARPC2O15144 300 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 TIMM8AO60220 97 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms