RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 RFLNBQ8N5W9 214 aa7.79□□□□□ -1.16
BRCA1-207ENST00000461798 SLC25A40Q8TBP6 338 aa7.79□□□□□ -1.16
BRCA1-207ENST00000461798 TMEM186Q96B77 213 aa7.79□□□□□ -1.16
BRCA1-207ENST00000461798 C4orf45Q96LM5 186 aa7.79□□□□□ -1.16
BRCA1-207ENST00000461798 Q96M85 177 aa7.79□□□□□ -1.16
BRCA1-207ENST00000461798 DIRC2Q96SL1 478 aa7.79□□□□□ -1.16
BRCA1-207ENST00000461798 FUZQ9BT04 418 aa7.79□□□□□ -1.16
BRCA1-207ENST00000461798 OR2J1Q9GZK6 312 aa7.79□□□□□ -1.16
BRCA1-207ENST00000461798 NDEL1Q9GZM8 345 aa7.79□□□□□ -1.16
BRCA1-207ENST00000461798 ELOVL3Q9HB03 270 aa7.79□□□□□ -1.16
BRCA1-207ENST00000461798 SPAG4Q9NPE6 437 aa7.79□□□□□ -1.16
BRCA1-207ENST00000461798 TREM2Q9NZC2 230 aa7.79□□□□□ -1.16
BRCA1-207ENST00000461798 VSX1Q9NZR4 365 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-207ENST00000461798 NDRG4Q9ULP0 352 aaKnown RBP7.79□□□□□ -1.16
BRCA1-207ENST00000461798 SAMD4AQ9UPU9 718 aaKnown RBP7.79□□□□□ -1.16
BRCA1-207ENST00000461798 ADAM18Q9Y3Q7 739 aa7.79□□□□□ -1.16
BRCA1-207ENST00000461798 FAM32AQ9Y421 112 aaKnown RBP7.79□□□□□ -1.16
BRCA1-207ENST00000461798 CUBNO60494 3623 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 TRAV20A0A0B4J274 112 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 TEX13CA0A0J9YWL9 993 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 A0A1W2PPL8 197 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 XKRYO14609 159 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 SNX3O60493 162 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 CDC14BO60729 498 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 DEAF1O75398 565 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-207ENST00000461798 IGHV1-46P01743 117 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 MSMBP08118 114 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 ANPEPP15144 967 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 CTLA4P16410 223 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 SDHAP31040 664 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 ARHGDIAP52565 204 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 SCRN3Q0VDG4 424 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 CDK5R2Q13319 367 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 KCNMB1Q16558 191 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 HFEQ30201 348 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 LIPNQ5VXI9 398 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 DPY19L2P2Q6ZN68 376 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 RFPL4BQ6ZWI9 263 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 USP51Q70EK9 711 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 ZER1Q7Z7L7 766 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 ADCK1Q86TW2 530 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 ICA1LQ8NDH6 482 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 OR51F2Q8NH61 342 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 ABHD4Q8TB40 342 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 IPCEF1Q8WWN9 437 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-207ENST00000461798 GTF3AQ92664 365 aaKnown RBP7.78□□□□□ -1.16
BRCA1-207ENST00000461798 ELMOD3Q96FG2 381 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 FAM46AQ96IP4 442 aaKnown RBP7.78□□□□□ -1.16
BRCA1-207ENST00000461798 ZNF570Q96NI8 536 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 DECR2Q9NUI1 292 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 HIF1ANQ9NWT6 349 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 ZDHHC8Q9ULC8 765 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 SVEP1Q4LDE5 3571 aa7.78□□□□□ -1.16
BRCA1-207ENST00000461798 A0A0A6YYJ9 748 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 TRBV4-1A0A0J9YWV2 114 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 PLSCR5A0PG75 271 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 UNC119BA6NIH7 251 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 ZSCAN5BA6NJL1 495 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 CLDN25C9JDP6 229 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 H7C1C5 153 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 J3QW42 95 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 IMPA2O14732 288 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 ARPC3O15145 178 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 SGCEO43556 437 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 GMNNO75496 209 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 KHDRBS3O75525 346 aaKnown RBP7.77□□□□□ -1.17
BRCA1-207ENST00000461798 UBOX5O94941 541 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 SEMG1P04279 462 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 HSD17B1P14061 328 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 ITGA2P17301 1181 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 KITLGP21583 273 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 SRP14P37108 136 aaKnown RBP7.77□□□□□ -1.17
BRCA1-207ENST00000461798 SMIM11AP58511 58 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 FXYD6P3P58550 94 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 LCN6P62502 163 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 HIST1H3AP68431 136 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 GLO1Q04760 184 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 SLC3A1Q07837 685 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 PSG7Q13046 419 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 AQP6Q13520 282 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 SEC23BQ15437 767 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 TSTQ16762 297 aaKnown RBP7.77□□□□□ -1.17
BRCA1-207ENST00000461798 SPATS1Q496A3 300 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 ZMAT1Q5H9K5 638 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 MTX3Q5HYI7 312 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 SPATA46Q5T0L3 261 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 HIST2H3PS2Q5TEC6 136 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 ACSM5Q6NUN0 579 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 HIST2H3AQ71DI3 136 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 VASH1Q7L8A9 365 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-207ENST00000461798 GLB1L2Q8IW92 636 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 TEX29Q8N6K0 151 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 FAM86B1Q8N7N1 296 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 NPEPL1Q8NDH3 523 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 RAB1CQ92928 201 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 PYURFQ96I23 114 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 RSRC1Q96IZ7 334 aaKnown RBP7.77□□□□□ -1.17
BRCA1-207ENST00000461798 COG8Q96MW5 612 aa7.77□□□□□ -1.17
BRCA1-207ENST00000461798 DCLRE1CQ96SD1 692 aaKnown RBP7.77□□□□□ -1.17
BRCA1-207ENST00000461798 GPA33Q99795 319 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms