RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 USP51Q70EK9 711 aa10.61□□□□□ -0.71
CPSF4-208ENST00000452047 CPLX4Q7Z7G2 160 aa10.61□□□□□ -0.71
CPSF4-208ENST00000452047 ADCK1Q86TW2 530 aa10.61□□□□□ -0.71
CPSF4-208ENST00000452047 PGAM4Q8N0Y7 254 aa10.61□□□□□ -0.71
CPSF4-208ENST00000452047 C4orf45Q96LM5 186 aa10.61□□□□□ -0.71
CPSF4-208ENST00000452047 SYT4Q9H2B2 425 aa10.61□□□□□ -0.71
CPSF4-208ENST00000452047 SAP30LQ9HAJ7 183 aa10.61□□□□□ -0.71
CPSF4-208ENST00000452047 TREM2Q9NZC2 230 aa10.61□□□□□ -0.71
CPSF4-208ENST00000452047 CD300AQ9UGN4 299 aa10.61□□□□□ -0.71
CPSF4-208ENST00000452047 MAGEL2Q9UJ55 1249 aa10.61□□□□□ -0.71
CPSF4-208ENST00000452047 KLHL21Q9UJP4 597 aa10.61□□□□□ -0.71
CPSF4-208ENST00000452047 NDRG4Q9ULP0 352 aaKnown RBP10.61□□□□□ -0.71
CPSF4-208ENST00000452047 CACNG2Q9Y698 323 aa10.61□□□□□ -0.71
CPSF4-208ENST00000452047 V9GYQ6 96 aa10.61□□□□□ -0.71
CPSF4-208ENST00000452047 SOCS2O14508 198 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 DOK2O60496 412 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 TXNDC12O95881 172 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 MSMBP08118 114 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 ITGA2P17301 1181 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 GYS2P54840 703 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 TEKQ02763 1124 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 SCRN3Q0VDG4 424 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 AQP6Q13520 282 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 TSTQ16762 297 aaKnown RBP10.6□□□□□ -0.71
CPSF4-208ENST00000452047 OTPQ5XKR4 325 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 DPY19L2P2Q6ZN68 376 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 VASH1Q7L8A9 365 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-208ENST00000452047 GLCCI1Q86VQ1 547 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 GLB1L2Q8IW92 636 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 OR52J3Q8NH60 311 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 TMEM186Q96B77 213 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 PYURFQ96I23 114 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 POFUT1Q9H488 388 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 ELOVL3Q9HB03 270 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 DECR2Q9NUI1 292 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 ARL8BQ9NVJ2 186 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 TBCCD1Q9NVR7 557 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 CGGBP1Q9UFW8 167 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-208ENST00000452047 AURKCQ9UQB9 309 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 COA3Q9Y2R0 106 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-208ENST00000452047 IER3IP1Q9Y5U9 82 aa10.6□□□□□ -0.71
CPSF4-208ENST00000452047 PLSCR5A0PG75 271 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 OR6C6A6NF89 314 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 UNC119BA6NIH7 251 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 CLDN25C9JDP6 229 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 DCTN6O00399 190 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 ARPC2O15144 300 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 SGCEO43556 437 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 SPRY3O43610 288 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 SLC16A7O60669 478 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 DEAF1O75398 565 aaPredicted RBP10.59□□□□□ -0.71
CPSF4-208ENST00000452047 GMNNO75496 209 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 KHDRBS3O75525 346 aaKnown RBP10.59□□□□□ -0.71
CPSF4-208ENST00000452047 UBOX5O94941 541 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 MPZL1O95297 269 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 ABHD16AO95870 558 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 PCMT1P22061 227 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 MSX2P35548 267 aaPredicted RBP10.59□□□□□ -0.71
CPSF4-208ENST00000452047 LIPAP38571 399 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 CDKN2AP42771 156 aaKnown RBP10.59□□□□□ -0.71
CPSF4-208ENST00000452047 HTR5AP47898 357 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 ARHGDIAP52565 204 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 LSM6P62312 80 aaKnown RBP10.59□□□□□ -0.71
CPSF4-208ENST00000452047 SRSF2Q01130 221 aaKnown RBP10.59□□□□□ -0.71
CPSF4-208ENST00000452047 PSG7Q13046 419 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 KRT72Q14CN4 511 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 SAMD4BQ5PRF9 694 aaKnown RBP10.59□□□□□ -0.71
CPSF4-208ENST00000452047 AVPI1Q5T686 147 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 SMARCD3Q6STE5 483 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 RINLQ6ZS11 566 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 PIGWQ7Z7B1 504 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 ZER1Q7Z7L7 766 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 FANK1Q8TC84 345 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 ELMOD3Q96FG2 381 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 NUAK2Q9H093 628 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 LPAR2Q9HBW0 351 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 KRCC1Q9NPI7 259 aaPredicted RBP10.59□□□□□ -0.71
CPSF4-208ENST00000452047 CYSLTR2Q9NS75 346 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 HIF1ANQ9NWT6 349 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 ASH2LQ9UBL3 628 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 TAGLN3Q9UI15 199 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 ARL2BPQ9Y2Y0 163 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 WIPI2Q9Y4P8 454 aa10.59□□□□□ -0.71
CPSF4-208ENST00000452047 TPD52L2O43399 206 aaKnown RBP10.58□□□□□ -0.72
CPSF4-208ENST00000452047 GADD45GO95257 159 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 CD55P08174 381 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 FPR3P25089 353 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 RPS6KA3P51812 740 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 SMIM11AP58511 58 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 GNGT1P63211 74 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 SPIBQ01892 262 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 MVKQ03426 396 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 KCNMB1Q16558 191 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 HFEQ30201 348 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 CCDC92Q53HC0 331 aaPredicted RBP10.58□□□□□ -0.72
CPSF4-208ENST00000452047 SPRNQ5BIV9 151 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 ARL9Q6T311 187 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 NPEPL1Q8NDH3 523 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 OR51F2Q8NH61 342 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 SLC7A6Q92536 515 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms