RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 FAM81AQ8TBF8 368 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 BCL2L2Q92843 193 aaPredicted RBP11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 HRASLS5Q96KN8 279 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 RDH12Q96NR8 316 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 FOXN4Q96NZ1 517 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 TSSK2Q96PF2 358 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 ALKBH3Q96Q83 286 aaPredicted RBP11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 IL4I1Q96RQ9 567 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 VRK1Q99986 396 aaPredicted RBP11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 HCAR1Q9BXC0 346 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 LINC00470Q9BZP3 86 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 RAB1BQ9H0U4 201 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 CA10Q9NS85 328 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 CRNNQ9UBG3 495 aaPredicted RBP11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 ENOPH1Q9UHY7 261 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 NDRG4Q9ULP0 352 aaKnown RBP11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 BAIAP2Q9UQB8 552 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 RCE1Q9Y256 329 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 GMPPBQ9Y5P6 360 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 LOC100289279A0A1B0GTE1 492 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 OR6C68A6NDL8 312 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 NPIPB13A6NJU9 1138 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 NPIPB4C9JG80 1138 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 DCTN6O00399 190 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 SLC16A6O15403 523 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 LY6HO94772 140 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 CLUP10909 449 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 APEHP13798 732 aaKnown RBP11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 HNF1AP20823 631 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 CAPGP40121 348 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 CLRN1P58418 232 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 NAAAQ02083 359 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 CD47Q08722 323 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 GGTLC2Q14390 218 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 EFNB3Q15768 340 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 SNAPC1Q16533 368 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 OTPQ5XKR4 325 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 JAZF1Q86VZ6 243 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 C20orf196Q8IYI0 205 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 TCEANCQ8N8B7 351 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 NPEPL1Q8NDH3 523 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 ZNF555Q8NEP9 628 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 ZNRF4Q8WWF5 429 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 TMEM54Q969K7 222 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 NMD3Q96D46 503 aaKnown RBP11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 ZNF837Q96EG3 531 aaPredicted RBP11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 SLC25A44Q96H78 314 aaPredicted RBP11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 SORCS2Q96PQ0 1159 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 DDOQ99489 341 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 MRPL13Q9BYD1 178 aaKnown RBP11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 SYT4Q9H2B2 425 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 RERGLQ9H628 205 aa11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 HINT3Q9NQE9 182 aaKnown RBP11.89□□□□□ -0.51
PDLIM2-213ENST00000448520 SLC22A23A1A5C7 686 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 PRSS37A4D1T9 235 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 A6NIZ1 184 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 RIIAD1A6NNX1 92 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 RPL36A-HNRNPH2H7BZ11 118 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 XKRYO14609 159 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 AKAP8O43823 692 aaKnown RBP11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 IDH3BO43837 385 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 SLC43A1O75387 559 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 GPANK1O95872 356 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 IGLV1-44P01699 117 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 IGHG1P01857 330 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 HMGN1P05114 100 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 GYPBP06028 91 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 ERCC1P07992 297 aaPredicted RBP11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 OR4A8P0C604 315 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 ZNF16P17020 682 aaPredicted RBP11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 PYCR1P32322 319 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 CSNK1A1P48729 337 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 PPOXP50336 477 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 RAP1BP61224 184 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 RAP1AP62834 184 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 PLBD1Q6P4A8 553 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 LRFN4Q6PJG9 635 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 CCDC36Q8IYA8 594 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 BBS1Q8NFJ9 593 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 IL17RDQ8NFM7 739 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 OR6N1Q8NGY5 312 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 NEU4Q8WWR8 484 aaPredicted RBP11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 NSMAFQ92636 917 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 TFAP2CQ92754 450 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 ZNF566Q969W8 418 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 OTULINQ96BN8 352 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 MSI2Q96DH6 328 aaKnown RBP11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 RASSF4Q9H2L5 321 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 PLK3Q9H4B4 646 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 RPRD1BQ9NQG5 326 aaKnown RBP11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 CMC2Q9NRP2 79 aa11.88□□□□□ -0.51
PDLIM2-213ENST00000448520 H0YJX3 145 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 SEC14L2O76054 403 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 IGKV3-15P01624 115 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 QDPRP09417 244 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 CBR1P16152 277 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 CTLA4P16410 223 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 ZNF3P17036 446 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 IDH3GP51553 393 aaPredicted RBP11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 EFNB1P98172 346 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms