RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 CCR9P51686 369 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF133P52736 654 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 SUCLG1P53597 346 aaKnown RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 HCCSP53701 268 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 UCNP55089 124 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 CLDN15P56746 228 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 CLDN17P56750 224 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 CLDN18P56856 261 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 CLDN20P56880 219 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 NCS1P62166 190 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 LSM3P62310 102 aaKnown RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 LSM6P62312 80 aaKnown RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 LCN6P62502 163 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 RPL11P62913 178 aaKnown RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ADAM8P78325 824 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 RASGEF1BQ0VAM2 473 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 AQP6Q13520 282 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 CAMK2DQ13557 499 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 MELKQ14680 651 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 SLC17A1Q14916 467 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 RNPS1Q15287 305 aaKnown RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 SF3B4Q15427 424 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 STK11Q15831 433 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 HIST3H3Q16695 136 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF404Q494X3 552 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 TP53I3Q53FA7 332 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 YIF1BQ5BJH7 314 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 C10orf128Q5T292 105 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF684Q5T5D7 378 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 DMKNQ6E0U4 476 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 VASNQ6EMK4 673 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 SLC25A47Q6Q0C1 308 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ARL9Q6T311 187 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 TRILQ7L0X0 811 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 FCRLAQ7L513 359 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 CHMP1BQ7LBR1 199 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 DPY19L4Q7Z388 723 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 FGD2Q7Z6J4 655 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 KRT77Q7Z794 578 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 GGNQ86UU5 652 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 TPRA1Q86W33 373 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF679Q8IYX0 411 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 TMEM251Q8N6I4 163 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 YIPF7Q8N8F6 280 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 NOXO1Q8NFA2 376 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 FDCSPQ8NFU4 85 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 SLC26A10Q8NG04 563 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 OR6N1Q8NGY5 312 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 OR6N2Q8NGY6 317 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 OR2AJ1Q8NGZ0 328 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 OR10D3Q8NH80 312 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 MCFD2Q8NI22 146 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 NDNFQ8TB73 568 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZPLD1Q8TCW7 415 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 THEM6Q8WUY1 208 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNRF4Q8WWF5 429 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 AP3S1Q92572 193 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 GHSRQ92847 366 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 RPL3LQ92901 407 aaKnown RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ABTB1Q969K4 478 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 TMEM54Q969K7 222 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 TMEM203Q969S6 136 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 MCHR2Q969V1 340 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 TMEM45BQ96B21 275 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 DNAJA3Q96EY1 480 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 PELI1Q96FA3 418 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 TXNDC15Q96J42 360 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ADGRG7Q96K78 797 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 OR2M2Q96R28 347 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 SMAD5Q99717 465 aaKnown RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 TIMP4Q99727 224 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 CENPOQ9BU64 300 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 NXF2Q9GZY0 626 aaKnown RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 LDAHQ9H6V9 325 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 EXO5Q9H790 373 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 NIPAL2Q9H841 368 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZDHHC11Q9H8X9 412 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 RNF122Q9H9V4 155 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ELOVL3Q9HB03 270 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 PLGRKTQ9HBL7 147 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 HMG20AQ9NP66 347 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 TXNL4BQ9NX01 149 aaKnown RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 MED29Q9NX70 200 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 GALNT8Q9NY28 637 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 GLTPQ9NZD2 209 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 DKK4Q9UBT3 224 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 KLK13Q9UKR3 277 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 IKZF2Q9UKS7 526 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 COA3Q9Y2R0 106 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF175Q9Y473 711 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 PCDHGA9Q9Y5G4 932 aaKnown RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 PEX16Q9Y5Y5 336 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 MGAQ8IWI9 3026 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 TNRC6AQ8NDV7 1962 aaKnown RBP3.51□□□□□ -1.85
HMGB1P37-201ENST00000439613 CHD8Q9HCK8 2581 aa3.51□□□□□ -1.85
HMGB1P37-201ENST00000439613 IGKV3D-15A0A087WSY6 115 aa3.51□□□□□ -1.85
HMGB1P37-201ENST00000439613 TRGV5A0A0B4J1U4 118 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms