RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ASF1BQ9NVP2 202 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 PARPBPQ9NWS1 579 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 KCNG2Q9UJ96 466 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 B3GALT1Q9Y5Z6 326 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 AMY2AP04746 511 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 NAGAP17050 411 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 SRMP19623 302 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 HLA-DMAP28067 261 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 GALNSP34059 522 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 RFC3P40938 356 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 VEGFCP49767 419 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 CCL11P51671 97 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 LTBQ06643 244 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 RNASE10Q5GAN6 216 aaKnown RBP10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 ZNF770Q6IQ21 691 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 C3P1Q6ZMU1 363 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 SLC16A14Q7RTX9 510 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 GLB1L2Q8IW92 636 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 UPRTQ96BW1 309 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 RAB33BQ9H082 229 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 UNC80Q8N2C7 3258 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 OR6C68A6NDL8 312 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 P2RY10O00398 339 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 SSX5O60225 188 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 PVALBP20472 110 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 RPS18P62269 152 aaKnown RBP10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 GABREP78334 506 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 CDK5R1Q15078 307 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 FAM76BQ5HYJ3 339 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 C1QL3Q5VWW1 255 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 PHYHIPQ92561 330 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 DDOQ99489 341 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 HCAR1Q9BXC0 346 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 P4HTMQ9NXG6 502 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 TAS2R8Q9NYW2 309 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 EMC3Q9P0I2 261 aa10.45□□□□□ -0.74
TRAPPC9-202ENST00000438773 GGT3PA6NGU5 568 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 TOR1AO14656 332 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 MT-CO3P00414 261 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 RGS19P49795 217 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 ACTBP60709 375 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 ACTG1P63261 375 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 METAP1DQ6UB28 335 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 SMIM19Q96E16 107 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 OR10A2Q9H208 303 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 CAMK2AQ9UQM7 478 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 ALPK3Q96L96 1907 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 ARGFXA6NJG6 315 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 NPR2P20594 1047 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 BDH1Q02338 343 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 AIMP2Q13155 320 aaKnown RBP10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 SLC22A6Q4U2R8 563 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 CD163Q86VB7 1156 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 SIAH3Q8IW03 269 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 C9orf40Q8IXQ3 194 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 EMC7Q9NPA0 242 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 FLVCR2Q9UPI3 526 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 NOSIPQ9Y314 301 aaKnown RBP10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 LGALS8O00214 317 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 DVL2O14641 736 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 TNFSF12O43508 249 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 CRTAPO75718 401 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 VAMP5O95183 116 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 QDPRP09417 244 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 POU3F3P20264 500 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 NUBPLQ8TB37 319 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 ZFAND1Q8TCF1 268 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 CALHM2Q9HA72 323 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 ASH2LQ9UBL3 628 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 SLC23A1Q9UHI7 598 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 PILRBQ9UKJ0 227 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 OR52A1Q9UKL2 312 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 B9D1Q9UPM9 204 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 KLRC4-KLRK1H3BQV0 150 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 IGHV3-9P01782 118 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 RAB40ALP0C0E4 278 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 ACAA2P42765 397 aaKnown RBP10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 HTR5AP47898 357 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 LCN10Q6JVE6 187 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 SAP25Q8TEE9 199 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 RAB40AQ8WXH6 277 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 WDFY2Q96P53 400 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 NKX3-1Q99801 234 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 ACTR6Q9GZN1 396 aa10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 EXOSC3Q9NQT5 275 aaKnown RBP10.44□□□□□ -0.74
TRAPPC9-202ENST00000438773 DOCK9Q9BZ29 2069 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 HELZP42694 1942 aaKnown RBP10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 GZMKP49863 264 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 SNU13P55769 128 aaKnown RBP10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 USF2Q15853 346 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 KRBOX4Q5JUW0 171 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 DVL3Q92997 716 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 TMEM184BQ9Y519 407 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 GPR171O14626 319 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 CXCL13O43927 109 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 RBMXL2O75526 392 aaKnown RBP10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 PTHLHP12272 177 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 CDKN2AP42771 156 aaKnown RBP10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 MAP2K6P52564 334 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms