RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ZNF84P51523 738 aa14.61□□□□□ -0.07
UBE3D-204ENST00000430071 EFNA4P52798 201 aa14.61□□□□□ -0.07
UBE3D-204ENST00000430071 CRMP1Q14194 572 aa14.61□□□□□ -0.07
UBE3D-204ENST00000430071 TRIP10Q15642 601 aa14.61□□□□□ -0.07
UBE3D-204ENST00000430071 KRT80Q6KB66 452 aa14.61□□□□□ -0.07
UBE3D-204ENST00000430071 CLEC2AQ6UVW9 174 aa14.61□□□□□ -0.07
UBE3D-204ENST00000430071 SKA3Q8IX90 412 aa14.61□□□□□ -0.07
UBE3D-204ENST00000430071 NABP1Q96AH0 204 aa14.61□□□□□ -0.07
UBE3D-204ENST00000430071 EME1Q96AY2 570 aa14.61□□□□□ -0.07
UBE3D-204ENST00000430071 FOXN4Q96NZ1 517 aa14.61□□□□□ -0.07
UBE3D-204ENST00000430071 VRK1Q99986 396 aaPredicted RBP14.61□□□□□ -0.07
UBE3D-204ENST00000430071 GABARAPL3Q9BY60 117 aa14.61□□□□□ -0.07
UBE3D-204ENST00000430071 RERGLQ9H628 205 aa14.61□□□□□ -0.07
UBE3D-204ENST00000430071 CMC2Q9NRP2 79 aa14.61□□□□□ -0.07
UBE3D-204ENST00000430071 PMF1-BGLAPU3KQ54 211 aa14.61□□□□□ -0.07
UBE3D-204ENST00000430071 IGLV1-36A0A0B4J1U3 117 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 ZAR1LA6NP61 321 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 H0YHG0 523 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 F12P00748 615 aaPredicted RBP14.6□□□□□ -0.07
UBE3D-204ENST00000430071 RENP00797 406 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 ZNF14P17017 642 aaPredicted RBP14.6□□□□□ -0.07
UBE3D-204ENST00000430071 PEX2P28328 305 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 ARR3P36575 388 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 LRRC36Q1X8D7 754 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 LPCAT4Q643R3 524 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 FOXL2NBQ6ZUU3 175 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 OR6V1Q8N148 313 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 SLC22A24Q8N4F4 322 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 FAM168AQ92567 244 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 SH3GL3Q99963 347 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 PLK3Q9H4B4 646 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 RIBC2Q9H4K1 309 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 SRA1Q9HD15 236 aaKnown RBP14.6□□□□□ -0.07
UBE3D-204ENST00000430071 RPRD1BQ9NQG5 326 aaKnown RBP14.6□□□□□ -0.07
UBE3D-204ENST00000430071 YAE1D1Q9NRH1 226 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 KLHL21Q9UJP4 597 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 RIIAD1A6NNX1 92 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 SURF4O15260 269 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 CD5LO43866 347 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 KHDRBS3O75525 346 aaKnown RBP14.6□□□□□ -0.07
UBE3D-204ENST00000430071 SCG5P05408 212 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 PTDSS1P48651 473 aaKnown RBP14.6□□□□□ -0.07
UBE3D-204ENST00000430071 MRPS34P82930 218 aaKnown RBP14.6□□□□□ -0.07
UBE3D-204ENST00000430071 SNTB2Q13425 540 aaKnown RBP14.6□□□□□ -0.07
UBE3D-204ENST00000430071 RAB39AQ14964 217 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 GSG1Q2KHT4 349 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 SLX4IPQ5VYV7 408 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 NUP37Q8NFH4 326 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 OR4F15Q8NGB8 312 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 ZNRF4Q8WWF5 429 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 MBOAT4Q96T53 435 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 DOK1Q99704 481 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 NMNAT2Q9BZQ4 307 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 B9D1Q9UPM9 204 aa14.6□□□□□ -0.07
UBE3D-204ENST00000430071 COA3Q9Y2R0 106 aaPredicted RBP14.6□□□□□ -0.07
UBE3D-204ENST00000430071 DNHD1Q96M86 4753 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 A0A1W2PPL8 197 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 FAM183AA6NL82 134 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 B9A039 149 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 CASQ2O14958 399 aaPredicted RBP14.59□□□□□ -0.07
UBE3D-204ENST00000430071 CRLF1O75462 422 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 GPANK1O95872 356 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 IFNGP01579 166 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 HMGN1P05114 100 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 OR8G3PP0DMU2 310 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 ZNF35P13682 527 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 CRABP1P29762 137 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 SNRPD2P62316 118 aaKnown RBP14.59□□□□□ -0.07
UBE3D-204ENST00000430071 RAB1AP62820 205 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 EFNB3Q15768 340 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 SGCAQ16586 387 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 TMEM249Q2WGJ8 235 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 ZIK1Q3SY52 487 aaPredicted RBP14.59□□□□□ -0.07
UBE3D-204ENST00000430071 OTPQ5XKR4 325 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 C12orf73Q69YU5 71 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 ZBTB46Q86UZ6 589 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 ZNF584Q8IVC4 421 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 OR9Q1Q8NGQ5 310 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 MDFIQ99750 246 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 HCAR1Q9BXC0 346 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 MED20Q9H944 212 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 RNPEPL1Q9HAU8 725 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 TVP23BQ9NYZ1 205 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 ENOPH1Q9UHY7 261 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 FKBP7Q9Y680 259 aa14.59□□□□□ -0.07
UBE3D-204ENST00000430071 MXRA5Q9NR99 2828 aa14.58□□□□□ -0.07
UBE3D-204ENST00000430071 VWC2LB2RUY7 222 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 E9PQ18 207 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 M0R129 80 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 DLGAP1O14490 977 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 MGRN1O60291 552 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 MPZL1O95297 269 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 CLUP10909 449 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 ZNF3P17036 446 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 NPR2P20594 1047 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 NR4A1P22736 598 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 PAX7P23759 505 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 PYCR1P32322 319 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 RAD23AP54725 363 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 SLC34A1Q06495 639 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms