RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 BCKDKO14874 412 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 LSM8O95777 96 aaKnown RBP2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 IFNW1P05000 195 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 CLTAP09496 248 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 UBTFL6P0CB48 400 aaPredicted RBP2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 DUX4L2P0CJ85 424 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 DUX4L3P0CJ86 424 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 DUX4L5P0CJ88 424 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 DUX4L6P0CJ89 424 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 DUX4L7P0CJ90 424 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 OR5H8P0DN80 308 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 WARSP23381 471 aaKnown RBP2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 CD82P27701 267 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 MAS1LP35410 378 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 SLC1A2P43004 574 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 CYB561P49447 251 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 HERVK_113P61574 105 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 IFT88Q13099 833 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 GGTLC2Q14390 218 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 WDR43Q15061 677 aaKnown RBP eCLIP2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 POU2AF1Q16633 256 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 ZSCAN26Q16670 478 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 NKAIN1Q4KMZ8 207 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 CYB5R2Q6BCY4 276 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 H3F3CQ6NXT2 135 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 DUX4L9Q6RFH8 374 aaPredicted RBP2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 NPSR1Q6W5P4 371 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 ZNF321PQ8N8H1 164 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 GIMAP1Q8WWP7 306 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 IL22RA2Q969J5 263 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 TMEM230Q96A57 120 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 EXOSC8Q96B26 276 aaKnown RBP2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 TAAR1Q96RJ0 339 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 ISYNA1Q9NPH2 558 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 DUX4Q9UBX2 424 aa2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 RCL1Q9Y2P8 373 aaKnown RBP2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 PRG3Q9Y2Y8 225 aaPredicted RBP2.69□□□□□ -1.98
RNU2-28P-201ENST00000410457 UBN2Q6ZU65 1347 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 TRBV6-6A0A0A6YYG2 114 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 CIB4A0PJX0 185 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 TMEM120BA0PK00 339 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 TSPAN11A1L157 253 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 GABRR3A8MPY1 467 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 FLOT1O75955 427 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 SLC25A27O95847 323 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 OTCP00480 354 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 SRMP19623 302 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 MDKP21741 143 aaPredicted RBP2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 RPS10P46783 165 aaKnown RBP2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 UBE2AP49459 152 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 RND2P52198 227 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 ZNF136P52737 540 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 ZNF138P52744 262 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 DNAJC3Q13217 504 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 RSPO1Q2MKA7 263 aaPredicted RBP2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 PTPN20Q4JDL3 420 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 MBOAT2Q6ZWT7 520 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 FAM122BQ7Z309 247 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 VTCN1Q7Z7D3 282 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 LINC00523Q86TU6 105 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 CBLN2Q8IUK8 224 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 MKXQ8IYA7 352 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 LRRC75AQ8NAA5 344 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 INO80EQ8NBZ0 244 aaPredicted RBP2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 NOXO1Q8NFA2 376 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 PROKR2Q8NFJ6 384 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 TMEM158Q8WZ71 300 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 ZNF707Q96C28 371 aaPredicted RBP2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 COL21A1Q96P44 957 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 HDHD3Q9BSH5 251 aaPredicted RBP2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 PIGUQ9H490 435 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 TMEM9BQ9NQ34 198 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 ZNF331Q9NQX6 463 aaPredicted RBP2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 AGPAT4Q9NRZ5 378 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 PSG8Q9UQ74 426 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 RHBDD3Q9Y3P4 386 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 DENND4AQ7Z401 1863 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 MAP3K15Q6ZN16 1313 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 MROH5Q6ZUA9 1318 aa2.68□□□□□ -1.98
RNU2-28P-201ENST00000410457 PRRC2AP48634 2157 aaKnown RBP2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 IGLV1-36A0A0B4J1U3 117 aa2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 IGHV3-74A0A0B4J1X5 117 aa2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 IGHV3-66A0A0C4DH42 116 aa2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 NCBP2LA6PVI3 153 aaKnown RBP2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 SLC9A3R1O14745 358 aaPredicted RBP2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 ZBTB5O15062 677 aa2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 CD5LO43866 347 aa2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 CA11O75493 328 aa2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 SNAI1O95863 264 aaPredicted RBP2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 FABP3P05413 133 aa2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 DCNP07585 359 aaKnown RBP2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 ATF6P18850 670 aa2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 GGT1P19440 569 aa2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 RAB4AP20338 218 aa2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 CPN2P22792 545 aa2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 TUBG1P23258 451 aa2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 HOXA9P31269 272 aa2.67□□□□□ -1.98
RNU2-28P-201ENST00000410457 DRD3P35462 400 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms