RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 FAM214BQ7L5A3 538 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 FAM220AQ7Z4H9 259 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 ZFP41Q8N8Y5 198 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 OR10S1Q8NGN2 331 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 RPL3LQ92901 407 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 CDADC1Q9BWV3 514 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 MROQ9BYG7 248 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 GDF2Q9UK05 429 aaPredicted RBP17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 RTTNQ86VV8 2226 aa17.14■□□□□ 0.33
PDLIM2-205ENST00000397761 NOL3O60936 208 aaKnown RBP17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 TPOP07202 933 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 PSMA1P25786 263 aaKnown RBP17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 OPRL1P41146 370 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 AQP6Q13520 282 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 CDK5R1Q15078 307 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 SGCAQ16586 387 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 RPTNQ6XPR3 784 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 ZNF100Q8IYN0 542 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 ALDH16A1Q8IZ83 802 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 YIPF7Q8N8F6 280 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 HTRA1Q92743 480 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 PGLYRP3Q96LB9 341 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 FOXB1Q99853 325 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 OR51E2Q9H255 320 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 C1orf198Q9H425 327 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 ELOVL3Q9HB03 270 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 ASF1BQ9NVP2 202 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 ASH2LQ9UBL3 628 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 RALYQ9UKM9 306 aaKnown RBP17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 IKZF2Q9UKS7 526 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 STUB1Q9UNE7 303 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 ZNF835Q9Y2P0 537 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 GRIP1Q9Y3R0 1128 aa17.13■□□□□ 0.33
PDLIM2-205ENST00000397761 ZNF587BE7ETH6 402 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 PSMD9O00233 223 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 GPX5O75715 221 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 ATE1O95260 518 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 CST2P09228 141 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 GALP22466 123 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 PRR30Q53SZ7 412 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 C1orf185Q5T7R7 199 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 CORO6Q6QEF8 472 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 LRRN1Q6UXK5 716 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 CFAP77Q6ZQR2 320 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 CD163Q86VB7 1156 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 OR2AJ1Q8NGZ0 328 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 SMIM19Q96E16 107 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 PNRC2Q9NPJ4 139 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 POLR1DQ9Y2S0 133 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 EMC9Q9Y3B6 208 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 SLC22A1O15245 554 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 SRSF10O75494 262 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 KRT33AO76009 404 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 CNOT4O95628 575 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 IGHV3-9P01782 118 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 CRHP06850 196 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 NR4A1P22736 598 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 DCTDP32321 178 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 KIR2DL2P43627 348 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 RPS25P62851 125 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 EIF2S3LQ2VIR3 472 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 FBXW9Q5XUX1 488 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 TFAP2EQ6VUC0 442 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 KRT77Q7Z794 578 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 SLAMF6Q96DU3 332 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 ZFP3Q96NJ6 502 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 COQ7Q99807 217 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 WACQ9BTA9 647 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 LRP12Q9Y561 859 aa17.12■□□□□ 0.33
PDLIM2-205ENST00000397761 PNMA8CA0A1B0GUJ8 204 aa17.11■□□□□ 0.33
PDLIM2-205ENST00000397761 TRDV1A0A1B0GX56 115 aa17.11■□□□□ 0.33
PDLIM2-205ENST00000397761 B4GALT1P15291 398 aa17.11■□□□□ 0.33
PDLIM2-205ENST00000397761 FGF9P31371 208 aaPredicted RBP17.11■□□□□ 0.33
PDLIM2-205ENST00000397761 TIMP3P35625 211 aa17.11■□□□□ 0.33
PDLIM2-205ENST00000397761 PSMB10P40306 273 aa17.11■□□□□ 0.33
PDLIM2-205ENST00000397761 NANOS3P60323 173 aaKnown RBP17.11■□□□□ 0.33
PDLIM2-205ENST00000397761 TRAM1Q15629 374 aa17.11■□□□□ 0.33
PDLIM2-205ENST00000397761 ABHD12BQ7Z5M8 362 aaPredicted RBP17.11■□□□□ 0.33
PDLIM2-205ENST00000397761 SYT9Q86SS6 491 aa17.11■□□□□ 0.33
PDLIM2-205ENST00000397761 GCNT2Q8N0V5 402 aa17.11■□□□□ 0.33
PDLIM2-205ENST00000397761 SLC22A24Q8N4F4 322 aa17.11■□□□□ 0.33
PDLIM2-205ENST00000397761 OR6K3Q8NGY3 331 aa17.11■□□□□ 0.33
PDLIM2-205ENST00000397761 DDX28Q9NUL7 540 aaKnown RBP17.11■□□□□ 0.33
PDLIM2-205ENST00000397761 UPB1Q9UBR1 384 aa17.11■□□□□ 0.33
PDLIM2-205ENST00000397761 PRSS50Q9UI38 385 aa17.11■□□□□ 0.33
PDLIM2-205ENST00000397761 ZNF878C9JN71 531 aa17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 ERVH48-1M5A8F1 160 aa17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 LRRTM2O43300 516 aa17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 GPRIN2O60269 458 aa17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 TOXO94900 526 aa17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 EDN3P14138 238 aa17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 ABOP16442 354 aa17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 CCR9P51686 369 aa17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 RIDAP52758 137 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 SH3BGRP55822 239 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 NCS1P62166 190 aa17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 ARF1P84077 181 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 ARL9Q6T311 187 aa17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 GJC3Q8NFK1 279 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms