RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 MS4A7Q9GZW8 240 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 FKRPQ9H9S5 495 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 ENY2Q9NPA8 101 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 PCM1Q15154 2024 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 H3BUI4 141 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 CISD3P0C7P0 127 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 GABREP78334 506 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 HSF1Q00613 529 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 VWA2Q5GFL6 755 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 TMEM201Q5SNT2 666 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 TMEM182Q6ZP80 229 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 MDGA2Q7Z553 956 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 WDR34Q96EX3 536 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF681Q96N22 645 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 TSPAN32Q96QS1 320 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 C1orf198Q9H425 327 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 KCND3Q9UK17 655 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 HTRA4P83105 476 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 IFITM2Q01629 132 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 RIN1Q13671 783 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 CNN3Q15417 329 aaKnown RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 MRM1Q6IN84 353 aaKnown RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 RAB11FIP2Q7L804 512 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 ABHD1Q96SE0 405 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 NELFAQ9H3P2 528 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 IL20Q9NYY1 176 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 SIGLEC7Q9Y286 467 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 SPAG17Q6Q759 2223 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 CENPVL1A0A0U1RR11 272 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 KCNAB3O43448 404 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 CTSVO60911 334 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 TUSC2O75896 110 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 ITGB2P05107 769 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 EN2P19622 333 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 ALOX5APP20292 161 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 PDZD11Q5EBL8 140 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 TMED6Q8WW62 240 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 CMSS1Q9BQ75 279 aaKnown RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 QPCTLQ9NXS2 382 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF230Q9UIE0 474 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 RPS10-NUDT3A0A1W2PQS6 291 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 OR6C68A6NDL8 312 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF217O75362 1048 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 IGF2P01344 180 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF44P15621 663 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 GDF1P27539 372 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 RPS10P46783 165 aaKnown RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 RTL10Q7L3V2 364 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 DND1Q8IYX4 353 aaKnown RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 KCNRGQ8N5I3 272 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 SLC46A1Q96NT5 459 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 TCRBV16S1A1N1A0A5B0 115 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 MUC20Q8N307 709 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 KCNJ16Q9NPI9 418 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 SLC17A4Q9Y2C5 497 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 SULT1C2O00338 296 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 PHF1O43189 567 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 CD38P28907 300 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 HMGA2P52926 109 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 B3GNTL1Q67FW5 361 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 RNF141Q8WVD5 230 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 JAM3Q9BX67 310 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 C1QTNF6Q9BXI9 259 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 GSX2Q9BZM3 304 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 METTL9Q9H1A3 318 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 MRPL22Q9NWU5 206 aaKnown RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 PCDHGA5Q9Y5G8 931 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 PRSS37A4D1T9 235 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 GCM2O75603 506 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 HTR5AP47898 357 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 RAB5CP51148 216 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 HLXQ14774 488 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-202ENST00000375340 OR5B12Q96R08 314 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 MED29Q9NX70 200 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 EMC3Q9P0I2 261 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 OR5V1Q9UGF6 321 aa5.94□□□□□ -1.46
SMC1A-202ENST00000375340 FAM221AA4D161 298 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 TTLL8A6PVC2 850 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 SCRG1O75711 98 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF728P0DKX0 622 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 RPA2P15927 270 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 C14orf28Q4W4Y0 310 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 MARCH1Q8TCQ1 289 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 SHDQ96IW2 340 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 SLC25A32Q9H2D1 315 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 CHRDQ9H2X0 955 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 POMT2Q9UKY4 750 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 URGCP-MRPS24S4R325 110 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 MEIKINA0A087WXM9 373 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 OR2T1O43869 369 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 FOLR3P41439 243 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 NDUFA6P56556 154 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 BATFQ16520 125 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 MRPL21Q7Z2W9 205 aaKnown RBP5.93□□□□□ -1.46
SMC1A-202ENST00000375340 SECTM1Q8WVN6 248 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 SLAMF6Q96DU3 332 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 LPAR4Q99677 370 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 LUZP4Q9P127 313 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 IFNA1P01562 189 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms