RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ELOVL3Q9HB03 270 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 TBCCD1Q9NVR7 557 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 TREM2Q9NZC2 230 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ADA2Q9NZK5 511 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 IL20RAQ9UHF4 553 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 NDRG4Q9ULP0 352 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 FAM32AQ9Y421 112 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 CACNG2Q9Y698 323 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 OR6C6A6NF89 314 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 XKRYO14609 159 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 CDC14BO60729 498 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 DEAF1O75398 565 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 UBOX5O94941 541 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 MPZL1O95297 269 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 MT-ND5P03915 603 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 MSMBP08118 114 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 CD55P08174 381 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 TUBG1P23258 451 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 LIPAP38571 399 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 TEKQ02763 1124 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SCRN3Q0VDG4 424 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 PSG7Q13046 419 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 AQP6Q13520 282 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 TSTQ16762 297 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 CCDC92Q53HC0 331 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SPRNQ5BIV9 151 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 FGD3Q5JSP0 725 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 USP51Q70EK9 711 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ADCK1Q86TW2 530 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 PGAM4Q8N0Y7 254 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 OR52J3Q8NH60 311 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 TMEM186Q96B77 213 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 FAM107BQ9H098 131 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SYT4Q9H2B2 425 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 POFUT1Q9H488 388 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 NARFLQ9H6Q4 476 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SAP30LQ9HAJ7 183 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 TUBG2Q9NRH3 451 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 CGGBP1Q9UFW8 167 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ZDHHC8Q9ULC8 765 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 COA3Q9Y2R0 106 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 IER3IP1Q9Y5U9 82 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 TANC2Q9HCD6 1990 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 UNC119BA6NIH7 251 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 DCTN6O00399 190 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SGCEO43556 437 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SPRY3O43610 288 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SLC16A7O60669 478 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 KHDRBS3O75525 346 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ITGA2P17301 1181 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 HIST1H3AP68431 136 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SRSF2Q01130 221 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 CDK5R2Q13319 367 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 HIST2H3PS2Q5TEC6 136 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SMARCD3Q6STE5 483 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ARL9Q6T311 187 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 HIST2H3AQ71DI3 136 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 CPLX4Q7Z7G2 160 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 GLCCI1Q86VQ1 547 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 GLB1L2Q8IW92 636 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 NDEL1Q9GZM8 345 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 NUAK2Q9H093 628 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 NSRP1Q9H0G5 558 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ZNF665Q9H7R5 613 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 G6PC2Q9NQR9 355 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 CYSLTR2Q9NS75 346 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 DECR2Q9NUI1 292 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ARL8BQ9NVJ2 186 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 HIF1ANQ9NWT6 349 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 MAGEL2Q9UJ55 1249 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 STARD10Q9Y365 291 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 WIPI2Q9Y4P8 454 aa11.6□□□□□ -0.55
TNFRSF1A-202ENST00000366159 PLSCR5A0PG75 271 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SOCS2O14508 198 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ARPC2O15144 300 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ARPC3O15145 178 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 DOK2O60496 412 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 KITLGP21583 273 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 PCMT1P22061 227 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 MSX2P35548 267 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ARHGDIAP52565 204 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 HMGA2P52926 109 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 GYS2P54840 703 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 MVKQ03426 396 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 RSPO1Q2MKA7 263 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 HFEQ30201 348 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 RFX4Q33E94 735 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SPATS1Q496A3 300 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SAMD4BQ5PRF9 694 aaKnown RBP11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 AVPI1Q5T686 147 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 OTPQ5XKR4 325 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 Q6ZR03 302 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 C1orf229Q6ZS94 237 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 RFLNBQ8N5W9 214 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SLC7A6Q92536 515 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ELMOD3Q96FG2 381 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 TSSK2Q96PF2 358 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 DIRC2Q96SL1 478 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 CDRT15Q96T59 188 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 MSL2Q9HCI7 577 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms